Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AP003071.4-201ENST00000562276 1284 ntBASIC24.33■■□□□ 1.49
CDCA5Q96FF9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC24.33■■□□□ 1.49
CDCA5Q96FF9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDCA5Q96FF9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDCA5Q96FF9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDCA5Q96FF9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
CDCA5Q96FF9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.32■■□□□ 1.48
CDCA5Q96FF9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC24.32■■□□□ 1.48
CDCA5Q96FF9 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDCA5Q96FF9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDCA5Q96FF9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
CDCA5Q96FF9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDCA5Q96FF9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.31■■□□□ 1.48
CDCA5Q96FF9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CDCA5Q96FF9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDCA5Q96FF9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC24.31■■□□□ 1.48
CDCA5Q96FF9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.31■■□□□ 1.48
CDCA5Q96FF9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDCA5Q96FF9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
CDCA5Q96FF9 MMP23A-201ENST00000234610 1017 ntBASIC24.3■■□□□ 1.48
CDCA5Q96FF9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDCA5Q96FF9 RER1-204ENST00000378518 522 ntTSL 3 BASIC24.3■■□□□ 1.48
CDCA5Q96FF9 SAPCD2P4-201ENST00000424595 1171 ntBASIC24.3■■□□□ 1.48
CDCA5Q96FF9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC24.3■■□□□ 1.48
CDCA5Q96FF9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDCA5Q96FF9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC24.3■■□□□ 1.48
CDCA5Q96FF9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC24.3■■□□□ 1.48
CDCA5Q96FF9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
CDCA5Q96FF9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDCA5Q96FF9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.3■■□□□ 1.48
CDCA5Q96FF9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDCA5Q96FF9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDCA5Q96FF9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDCA5Q96FF9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDCA5Q96FF9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDCA5Q96FF9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC24.29■■□□□ 1.48
CDCA5Q96FF9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC24.29■■□□□ 1.48
CDCA5Q96FF9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC24.29■■□□□ 1.48
CDCA5Q96FF9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
CDCA5Q96FF9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
CDCA5Q96FF9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDCA5Q96FF9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.29■■□□□ 1.48
CDCA5Q96FF9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CDCA5Q96FF9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC24.29■■□□□ 1.48
CDCA5Q96FF9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDCA5Q96FF9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDCA5Q96FF9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC24.29■■□□□ 1.48
CDCA5Q96FF9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDCA5Q96FF9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDCA5Q96FF9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
CDCA5Q96FF9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDCA5Q96FF9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
CDCA5Q96FF9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CDCA5Q96FF9 AL390719.1-204ENST00000412397 1219 ntBASIC24.28■■□□□ 1.48
CDCA5Q96FF9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC24.28■■□□□ 1.48
CDCA5Q96FF9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC24.28■■□□□ 1.48
CDCA5Q96FF9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
CDCA5Q96FF9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC24.28■■□□□ 1.48
CDCA5Q96FF9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDCA5Q96FF9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDCA5Q96FF9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDCA5Q96FF9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDCA5Q96FF9 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC24.27■■□□□ 1.48
CDCA5Q96FF9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC24.27■■□□□ 1.48
CDCA5Q96FF9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDCA5Q96FF9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC24.27■■□□□ 1.48
CDCA5Q96FF9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CDCA5Q96FF9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC24.27■■□□□ 1.48
CDCA5Q96FF9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.27■■□□□ 1.48
CDCA5Q96FF9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC24.27■■□□□ 1.48
CDCA5Q96FF9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CDCA5Q96FF9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC24.27■■□□□ 1.48
CDCA5Q96FF9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDCA5Q96FF9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDCA5Q96FF9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDCA5Q96FF9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC24.26■■□□□ 1.47
CDCA5Q96FF9 AL355355.2-201ENST00000442321 338 ntBASIC24.26■■□□□ 1.47
CDCA5Q96FF9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC24.26■■□□□ 1.47
CDCA5Q96FF9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC24.26■■□□□ 1.47
CDCA5Q96FF9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDCA5Q96FF9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CDCA5Q96FF9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms