Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.02■□□□□ 0.96
RTP4Q96DX8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTP4Q96DX8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTP4Q96DX8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTP4Q96DX8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.02■□□□□ 0.96
RTP4Q96DX8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.02■□□□□ 0.96
RTP4Q96DX8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.02■□□□□ 0.96
RTP4Q96DX8 NTF6G-201ENST00000591094 616 ntBASIC21.02■□□□□ 0.96
RTP4Q96DX8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.02■□□□□ 0.96
RTP4Q96DX8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RTP4Q96DX8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTP4Q96DX8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.02■□□□□ 0.96
RTP4Q96DX8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTP4Q96DX8 AL512408.1-201ENST00000569378 2000 ntBASIC21.02■□□□□ 0.96
RTP4Q96DX8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RTP4Q96DX8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.02■□□□□ 0.95
RTP4Q96DX8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.02■□□□□ 0.95
RTP4Q96DX8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTP4Q96DX8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.01■□□□□ 0.95
RTP4Q96DX8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.01■□□□□ 0.95
RTP4Q96DX8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTP4Q96DX8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.01■□□□□ 0.95
RTP4Q96DX8 KRT18P61-201ENST00000585825 1298 ntBASIC21.01■□□□□ 0.95
RTP4Q96DX8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTP4Q96DX8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTP4Q96DX8 RBM17P2-201ENST00000616397 1405 ntBASIC21.01■□□□□ 0.95
RTP4Q96DX8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
RTP4Q96DX8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTP4Q96DX8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTP4Q96DX8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RTP4Q96DX8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTP4Q96DX8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RTP4Q96DX8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RTP4Q96DX8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTP4Q96DX8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21■□□□□ 0.95
RTP4Q96DX8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21■□□□□ 0.95
RTP4Q96DX8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTP4Q96DX8 AC091799.1-201ENST00000422823 811 ntBASIC21■□□□□ 0.95
RTP4Q96DX8 GXYLT1P2-201ENST00000433312 1230 ntBASIC21■□□□□ 0.95
RTP4Q96DX8 MIR2861-201ENST00000636310 90 ntBASIC21■□□□□ 0.95
RTP4Q96DX8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RTP4Q96DX8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RTP4Q96DX8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RTP4Q96DX8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTP4Q96DX8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTP4Q96DX8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTP4Q96DX8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RTP4Q96DX8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTP4Q96DX8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTP4Q96DX8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTP4Q96DX8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTP4Q96DX8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTP4Q96DX8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RTP4Q96DX8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.99■□□□□ 0.95
RTP4Q96DX8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTP4Q96DX8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTP4Q96DX8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.99■□□□□ 0.95
RTP4Q96DX8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.99■□□□□ 0.95
RTP4Q96DX8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTP4Q96DX8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.99■□□□□ 0.95
RTP4Q96DX8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.99■□□□□ 0.95
RTP4Q96DX8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.99■□□□□ 0.95
RTP4Q96DX8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.99■□□□□ 0.95
RTP4Q96DX8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
RTP4Q96DX8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.99■□□□□ 0.95
RTP4Q96DX8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTP4Q96DX8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTP4Q96DX8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RTP4Q96DX8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RTP4Q96DX8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTP4Q96DX8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RTP4Q96DX8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTP4Q96DX8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTP4Q96DX8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.98■□□□□ 0.95
RTP4Q96DX8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTP4Q96DX8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTP4Q96DX8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.98■□□□□ 0.95
RTP4Q96DX8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTP4Q96DX8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTP4Q96DX8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTP4Q96DX8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.98■□□□□ 0.95
RTP4Q96DX8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RTP4Q96DX8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTP4Q96DX8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.98■□□□□ 0.95
RTP4Q96DX8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
RTP4Q96DX8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.98■□□□□ 0.95
RTP4Q96DX8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.98■□□□□ 0.95
RTP4Q96DX8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.98■□□□□ 0.95
RTP4Q96DX8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTP4Q96DX8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTP4Q96DX8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTP4Q96DX8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTP4Q96DX8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.98■□□□□ 0.95
RTP4Q96DX8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RTP4Q96DX8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTP4Q96DX8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.97■□□□□ 0.95
RTP4Q96DX8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RTP4Q96DX8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTP4Q96DX8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTP4Q96DX8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms