Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 AF213884.3-201ENST00000563833 479 ntBASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TUBGCP3Q96CW5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 MIR939-201ENST00000401314 82 ntBASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TUBGCP3Q96CW5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 AL512408.1-201ENST00000569378 2000 ntBASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 AC091305.1-201ENST00000479476 895 ntBASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 AC012414.1-201ENST00000556676 535 ntBASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 AL121603.2-201ENST00000557373 2117 ntBASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 AFG3L1P-217ENST00000557444 2447 ntBASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.92■□□□□ 0.78
TUBGCP3Q96CW5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 AC112907.3-201ENST00000577781 2400 ntBASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TUBGCP3Q96CW5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TUBGCP3Q96CW5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TUBGCP3Q96CW5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TUBGCP3Q96CW5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms