Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTP4A1Q93096 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTP4A1Q93096 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTP4A1Q93096 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PTP4A1Q93096 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTP4A1Q93096 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTP4A1Q93096 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
PTP4A1Q93096 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.45■□□□□ 0.54
PTP4A1Q93096 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTP4A1Q93096 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTP4A1Q93096 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PTP4A1Q93096 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PTP4A1Q93096 AC099778.1-201ENST00000568593 1911 ntBASIC18.45■□□□□ 0.54
PTP4A1Q93096 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PTP4A1Q93096 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.45■□□□□ 0.54
PTP4A1Q93096 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTP4A1Q93096 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.45■□□□□ 0.54
PTP4A1Q93096 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.45■□□□□ 0.54
PTP4A1Q93096 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.45■□□□□ 0.54
PTP4A1Q93096 TPRG1LP1-201ENST00000598702 760 ntBASIC18.45■□□□□ 0.54
PTP4A1Q93096 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTP4A1Q93096 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PTP4A1Q93096 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTP4A1Q93096 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTP4A1Q93096 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PTP4A1Q93096 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTP4A1Q93096 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTP4A1Q93096 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.45■□□□□ 0.54
PTP4A1Q93096 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.44■□□□□ 0.54
PTP4A1Q93096 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A1Q93096 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A1Q93096 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A1Q93096 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A1Q93096 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A1Q93096 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PTP4A1Q93096 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A1Q93096 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A1Q93096 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.44■□□□□ 0.54
PTP4A1Q93096 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.44■□□□□ 0.54
PTP4A1Q93096 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A1Q93096 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.44■□□□□ 0.54
PTP4A1Q93096 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.44■□□□□ 0.54
PTP4A1Q93096 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A1Q93096 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A1Q93096 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A1Q93096 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.44■□□□□ 0.54
PTP4A1Q93096 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A1Q93096 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTP4A1Q93096 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.43■□□□□ 0.54
PTP4A1Q93096 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.43■□□□□ 0.54
PTP4A1Q93096 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A1Q93096 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PTP4A1Q93096 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.43■□□□□ 0.54
PTP4A1Q93096 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A1Q93096 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A1Q93096 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.43■□□□□ 0.54
PTP4A1Q93096 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A1Q93096 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A1Q93096 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A1Q93096 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.43■□□□□ 0.54
PTP4A1Q93096 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A1Q93096 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.43■□□□□ 0.54
PTP4A1Q93096 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A1Q93096 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.43■□□□□ 0.54
PTP4A1Q93096 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.43■□□□□ 0.54
PTP4A1Q93096 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.43■□□□□ 0.54
PTP4A1Q93096 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A1Q93096 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PTP4A1Q93096 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PTP4A1Q93096 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.43■□□□□ 0.54
PTP4A1Q93096 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A1Q93096 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A1Q93096 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTP4A1Q93096 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.42■□□□□ 0.54
PTP4A1Q93096 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.42■□□□□ 0.54
PTP4A1Q93096 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PTP4A1Q93096 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.42■□□□□ 0.54
PTP4A1Q93096 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PTP4A1Q93096 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.42■□□□□ 0.54
PTP4A1Q93096 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.42■□□□□ 0.54
PTP4A1Q93096 ZNRF2P3-201ENST00000424200 374 ntBASIC18.42■□□□□ 0.54
PTP4A1Q93096 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.42■□□□□ 0.54
PTP4A1Q93096 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.42■□□□□ 0.54
PTP4A1Q93096 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTP4A1Q93096 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms