Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SMARCC1Q92922 FAM99A-202ENST00000538190 1989 ntBASIC26.53■■□□□ 1.84
SMARCC1Q92922 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SMARCC1Q92922 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
SMARCC1Q92922 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SMARCC1Q92922 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
SMARCC1Q92922 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SMARCC1Q92922 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.52■■□□□ 1.84
SMARCC1Q92922 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SMARCC1Q92922 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SMARCC1Q92922 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC26.52■■□□□ 1.84
SMARCC1Q92922 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SMARCC1Q92922 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.52■■□□□ 1.84
SMARCC1Q92922 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC26.52■■□□□ 1.84
SMARCC1Q92922 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC26.52■■□□□ 1.84
SMARCC1Q92922 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.52■■□□□ 1.84
SMARCC1Q92922 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC26.52■■□□□ 1.84
SMARCC1Q92922 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC26.52■■□□□ 1.84
SMARCC1Q92922 SNX21-213ENST00000614929 587 ntTSL 5 BASIC26.52■■□□□ 1.84
SMARCC1Q92922 AC097493.4-201ENST00000641197 219 ntBASIC26.52■■□□□ 1.84
SMARCC1Q92922 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.51■■□□□ 1.84
SMARCC1Q92922 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SMARCC1Q92922 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
SMARCC1Q92922 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SMARCC1Q92922 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SMARCC1Q92922 TSPY15P-201ENST00000457163 923 ntBASIC26.51■■□□□ 1.83
SMARCC1Q92922 PRKY-204ENST00000533551 1019 ntBASIC26.51■■□□□ 1.83
SMARCC1Q92922 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC26.51■■□□□ 1.83
SMARCC1Q92922 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SMARCC1Q92922 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC26.51■■□□□ 1.83
SMARCC1Q92922 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SMARCC1Q92922 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC26.5■■□□□ 1.83
SMARCC1Q92922 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SMARCC1Q92922 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SMARCC1Q92922 AL390719.1-204ENST00000412397 1219 ntBASIC26.5■■□□□ 1.83
SMARCC1Q92922 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
SMARCC1Q92922 AC012306.2-201ENST00000609350 630 ntBASIC26.5■■□□□ 1.83
SMARCC1Q92922 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SMARCC1Q92922 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SMARCC1Q92922 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SMARCC1Q92922 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SMARCC1Q92922 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SMARCC1Q92922 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SMARCC1Q92922 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC26.49■■□□□ 1.83
SMARCC1Q92922 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SMARCC1Q92922 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC26.49■■□□□ 1.83
SMARCC1Q92922 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
SMARCC1Q92922 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC26.49■■□□□ 1.83
SMARCC1Q92922 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.49■■□□□ 1.83
SMARCC1Q92922 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC26.49■■□□□ 1.83
SMARCC1Q92922 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC26.49■■□□□ 1.83
SMARCC1Q92922 CBFB-203ENST00000561924 584 ntTSL 5 BASIC26.49■■□□□ 1.83
SMARCC1Q92922 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC26.49■■□□□ 1.83
SMARCC1Q92922 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC26.49■■□□□ 1.83
SMARCC1Q92922 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
SMARCC1Q92922 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
SMARCC1Q92922 CABP2-204ENST00000636477 941 ntTSL 5 BASIC26.49■■□□□ 1.83
SMARCC1Q92922 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC26.49■■□□□ 1.83
SMARCC1Q92922 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.49■■□□□ 1.83
SMARCC1Q92922 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SMARCC1Q92922 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC26.48■■□□□ 1.83
SMARCC1Q92922 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SMARCC1Q92922 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC26.48■■□□□ 1.83
SMARCC1Q92922 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
SMARCC1Q92922 RER1-204ENST00000378518 522 ntTSL 3 BASIC26.48■■□□□ 1.83
SMARCC1Q92922 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC26.48■■□□□ 1.83
SMARCC1Q92922 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC26.48■■□□□ 1.83
SMARCC1Q92922 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SMARCC1Q92922 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SMARCC1Q92922 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SMARCC1Q92922 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC26.47■■□□□ 1.83
SMARCC1Q92922 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC26.47■■□□□ 1.83
SMARCC1Q92922 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
SMARCC1Q92922 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SMARCC1Q92922 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC26.47■■□□□ 1.83
SMARCC1Q92922 AL355075.4-201ENST00000554988 638 ntBASIC26.47■■□□□ 1.83
SMARCC1Q92922 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC26.47■■□□□ 1.83
SMARCC1Q92922 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC26.47■■□□□ 1.83
SMARCC1Q92922 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.47■■□□□ 1.83
SMARCC1Q92922 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SMARCC1Q92922 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SMARCC1Q92922 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
SMARCC1Q92922 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SMARCC1Q92922 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SMARCC1Q92922 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
SMARCC1Q92922 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SMARCC1Q92922 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
SMARCC1Q92922 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
SMARCC1Q92922 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC26.46■■□□□ 1.83
SMARCC1Q92922 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC26.46■■□□□ 1.83
SMARCC1Q92922 PENK-204ENST00000518770 863 ntTSL 2 BASIC26.46■■□□□ 1.83
SMARCC1Q92922 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC26.46■■□□□ 1.83
SMARCC1Q92922 TK2-213ENST00000563369 882 ntTSL 5 BASIC26.46■■□□□ 1.83
SMARCC1Q92922 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC26.46■■□□□ 1.83
SMARCC1Q92922 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
SMARCC1Q92922 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SMARCC1Q92922 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SMARCC1Q92922 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
SMARCC1Q92922 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC26.45■■□□□ 1.82
SMARCC1Q92922 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC26.45■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms