Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RAPGEF4Q8WZA2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RAPGEF4Q8WZA2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
RAPGEF4Q8WZA2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RAPGEF4Q8WZA2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC27.12■■□□□ 1.93
RAPGEF4Q8WZA2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RAPGEF4Q8WZA2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC27.12■■□□□ 1.93
RAPGEF4Q8WZA2 MTDHP1-201ENST00000605323 784 ntBASIC27.12■■□□□ 1.93
RAPGEF4Q8WZA2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
RAPGEF4Q8WZA2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RAPGEF4Q8WZA2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RAPGEF4Q8WZA2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
RAPGEF4Q8WZA2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC27.12■■□□□ 1.93
RAPGEF4Q8WZA2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC27.12■■□□□ 1.93
RAPGEF4Q8WZA2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RAPGEF4Q8WZA2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RAPGEF4Q8WZA2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 AC242852.2-201ENST00000615738 1807 ntBASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 GXYLT1P3-201ENST00000453058 1193 ntBASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC27.11■■□□□ 1.93
RAPGEF4Q8WZA2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC27.1■■□□□ 1.93
RAPGEF4Q8WZA2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC27.09■■□□□ 1.93
RAPGEF4Q8WZA2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC27.09■■□□□ 1.93
RAPGEF4Q8WZA2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RAPGEF4Q8WZA2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RAPGEF4Q8WZA2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC27.09■■□□□ 1.93
RAPGEF4Q8WZA2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RAPGEF4Q8WZA2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC27.09■■□□□ 1.93
RAPGEF4Q8WZA2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RAPGEF4Q8WZA2 AC005829.2-201ENST00000571422 1056 ntBASIC27.09■■□□□ 1.93
RAPGEF4Q8WZA2 AC120498.8-201ENST00000614275 531 ntBASIC27.09■■□□□ 1.93
RAPGEF4Q8WZA2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
RAPGEF4Q8WZA2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC27.09■■□□□ 1.93
RAPGEF4Q8WZA2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RAPGEF4Q8WZA2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RAPGEF4Q8WZA2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RAPGEF4Q8WZA2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 AC012618.2-201ENST00000428058 849 ntBASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 ABHD17AP6-201ENST00000458502 1044 ntBASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 AC124016.1-201ENST00000609552 612 ntBASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 AC006557.6-201ENST00000623071 864 ntBASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 AL023875.1-201ENST00000640777 796 ntBASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
RAPGEF4Q8WZA2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
RAPGEF4Q8WZA2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC27.08■■□□□ 1.92
RAPGEF4Q8WZA2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC27.07■■□□□ 1.92
RAPGEF4Q8WZA2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC27.07■■□□□ 1.92
RAPGEF4Q8WZA2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC27.07■■□□□ 1.92
RAPGEF4Q8WZA2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC27.07■■□□□ 1.92
RAPGEF4Q8WZA2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RAPGEF4Q8WZA2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
RAPGEF4Q8WZA2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC27.07■■□□□ 1.92
RAPGEF4Q8WZA2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC27.07■■□□□ 1.92
RAPGEF4Q8WZA2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC27.07■■□□□ 1.92
RAPGEF4Q8WZA2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms