Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 EDA-201ENST00000338901 1233 ntBASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 PBX2P1-201ENST00000493219 1291 ntBASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 TPRG1LP1-201ENST00000598702 760 ntBASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 AC106739.1-201ENST00000617035 715 ntBASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC44A1Q8WWI5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 RASA4CP-201ENST00000424092 1398 ntBASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 POU5F1P4-201ENST00000413175 1085 ntBASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 AC096631.2-201ENST00000436136 790 ntBASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC44A1Q8WWI5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC44A1Q8WWI5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC44A1Q8WWI5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SLC44A1Q8WWI5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
SLC44A1Q8WWI5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC44A1Q8WWI5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC44A1Q8WWI5 RARRES2P11-201ENST00000635158 484 ntBASIC20.6■□□□□ 0.89
SLC44A1Q8WWI5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC44A1Q8WWI5 TCF3P1-201ENST00000423021 1937 ntBASIC20.6■□□□□ 0.89
SLC44A1Q8WWI5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC44A1Q8WWI5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SLC44A1Q8WWI5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC44A1Q8WWI5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC44A1Q8WWI5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 MIR939-201ENST00000401314 82 ntBASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 AC008175.2-201ENST00000612840 297 ntBASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A1Q8WWI5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC44A1Q8WWI5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC44A1Q8WWI5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC44A1Q8WWI5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC44A1Q8WWI5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC44A1Q8WWI5 AL355001.2-201ENST00000620617 1191 ntBASIC20.58■□□□□ 0.89
SLC44A1Q8WWI5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.58■□□□□ 0.88
SLC44A1Q8WWI5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 AC091305.1-201ENST00000479476 895 ntBASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 AF213884.3-201ENST00000563833 479 ntBASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
SLC44A1Q8WWI5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms