Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 AP000974.1-201ENST00000623909 2387 ntBASIC18.83■□□□□ 0.6
TRUB1Q8WWH5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRUB1Q8WWH5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRUB1Q8WWH5 AC116562.4-201ENST00000641316 2276 ntBASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 KRT16P3-201ENST00000439127 1283 ntBASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 MIR3621-201ENST00000580529 85 ntBASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRUB1Q8WWH5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.8■□□□□ 0.6
TRUB1Q8WWH5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRUB1Q8WWH5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.8■□□□□ 0.6
TRUB1Q8WWH5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.8■□□□□ 0.6
TRUB1Q8WWH5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRUB1Q8WWH5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.8■□□□□ 0.6
TRUB1Q8WWH5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRUB1Q8WWH5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRUB1Q8WWH5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRUB1Q8WWH5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRUB1Q8WWH5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRUB1Q8WWH5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRUB1Q8WWH5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRUB1Q8WWH5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRUB1Q8WWH5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRUB1Q8WWH5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRUB1Q8WWH5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRUB1Q8WWH5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRUB1Q8WWH5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRUB1Q8WWH5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRUB1Q8WWH5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.78■□□□□ 0.6
TRUB1Q8WWH5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRUB1Q8WWH5 DUX4L19-201ENST00000557448 1267 ntBASIC18.78■□□□□ 0.6
TRUB1Q8WWH5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.78■□□□□ 0.6
TRUB1Q8WWH5 AC136469.2-201ENST00000623944 1028 ntBASIC18.78■□□□□ 0.6
TRUB1Q8WWH5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRUB1Q8WWH5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRUB1Q8WWH5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRUB1Q8WWH5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRUB1Q8WWH5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRUB1Q8WWH5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRUB1Q8WWH5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRUB1Q8WWH5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB1Q8WWH5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB1Q8WWH5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB1Q8WWH5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms