Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.51■□□□□ 0.55
FNDC9Q8TBE3 CDV3P1-201ENST00000471403 739 ntBASIC18.51■□□□□ 0.55
FNDC9Q8TBE3 AC142086.2-201ENST00000569753 217 ntBASIC18.51■□□□□ 0.55
FNDC9Q8TBE3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FNDC9Q8TBE3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
FNDC9Q8TBE3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
FNDC9Q8TBE3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FNDC9Q8TBE3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FNDC9Q8TBE3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
FNDC9Q8TBE3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FNDC9Q8TBE3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 AL512625.2-201ENST00000417533 625 ntBASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC9Q8TBE3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC9Q8TBE3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.49■□□□□ 0.55
FNDC9Q8TBE3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
FNDC9Q8TBE3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.49■□□□□ 0.55
FNDC9Q8TBE3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.49■□□□□ 0.55
FNDC9Q8TBE3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.49■□□□□ 0.55
FNDC9Q8TBE3 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.49■□□□□ 0.55
FNDC9Q8TBE3 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.49■□□□□ 0.55
FNDC9Q8TBE3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC9Q8TBE3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC9Q8TBE3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC9Q8TBE3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.49■□□□□ 0.55
FNDC9Q8TBE3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
FNDC9Q8TBE3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC9Q8TBE3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
FNDC9Q8TBE3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC9Q8TBE3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 FAM21FP-204ENST00000608637 956 ntBASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
FNDC9Q8TBE3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
FNDC9Q8TBE3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.47■□□□□ 0.55
FNDC9Q8TBE3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
FNDC9Q8TBE3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
FNDC9Q8TBE3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC9Q8TBE3 MIPEPP3-201ENST00000412105 444 ntBASIC18.47■□□□□ 0.55
FNDC9Q8TBE3 AC007322.3-201ENST00000426526 701 ntBASIC18.47■□□□□ 0.55
FNDC9Q8TBE3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC9Q8TBE3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.47■□□□□ 0.55
FNDC9Q8TBE3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
FNDC9Q8TBE3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC9Q8TBE3 AC010980.2-201ENST00000587099 1412 ntBASIC18.47■□□□□ 0.55
FNDC9Q8TBE3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.47■□□□□ 0.55
FNDC9Q8TBE3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC9Q8TBE3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.47■□□□□ 0.55
FNDC9Q8TBE3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
FNDC9Q8TBE3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC9Q8TBE3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC9Q8TBE3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
FNDC9Q8TBE3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
FNDC9Q8TBE3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.46■□□□□ 0.55
FNDC9Q8TBE3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC9Q8TBE3 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.46■□□□□ 0.55
FNDC9Q8TBE3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.46■□□□□ 0.55
FNDC9Q8TBE3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.46■□□□□ 0.55
FNDC9Q8TBE3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.46■□□□□ 0.55
FNDC9Q8TBE3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.46■□□□□ 0.55
FNDC9Q8TBE3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.46■□□□□ 0.55
FNDC9Q8TBE3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC9Q8TBE3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.46■□□□□ 0.55
FNDC9Q8TBE3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FNDC9Q8TBE3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms