Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CFAP43Q8NDM7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC32.46■■■□□ 2.79
CFAP43Q8NDM7 AL589743.5-201ENST00000616611 1050 ntBASIC32.46■■■□□ 2.79
CFAP43Q8NDM7 AC133561.5-201ENST00000635547 218 ntBASIC32.46■■■□□ 2.79
CFAP43Q8NDM7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CFAP43Q8NDM7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CFAP43Q8NDM7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CFAP43Q8NDM7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CFAP43Q8NDM7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CFAP43Q8NDM7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CFAP43Q8NDM7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC32.46■■■□□ 2.79
CFAP43Q8NDM7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CFAP43Q8NDM7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CFAP43Q8NDM7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
CFAP43Q8NDM7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC32.45■■■□□ 2.79
CFAP43Q8NDM7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
CFAP43Q8NDM7 AC012676.1-201ENST00000574705 1949 ntBASIC32.45■■■□□ 2.79
CFAP43Q8NDM7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
CFAP43Q8NDM7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC32.45■■■□□ 2.79
CFAP43Q8NDM7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
CFAP43Q8NDM7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC32.45■■■□□ 2.79
CFAP43Q8NDM7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
CFAP43Q8NDM7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC32.45■■■□□ 2.78
CFAP43Q8NDM7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
CFAP43Q8NDM7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CFAP43Q8NDM7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
CFAP43Q8NDM7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC32.44■■■□□ 2.78
CFAP43Q8NDM7 SAPCD2P1-201ENST00000395413 1184 ntBASIC32.44■■■□□ 2.78
CFAP43Q8NDM7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC32.44■■■□□ 2.78
CFAP43Q8NDM7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC32.44■■■□□ 2.78
CFAP43Q8NDM7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CFAP43Q8NDM7 MCRIP2P1-201ENST00000394346 511 ntBASIC32.43■■■□□ 2.78
CFAP43Q8NDM7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC32.43■■■□□ 2.78
CFAP43Q8NDM7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CFAP43Q8NDM7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
CFAP43Q8NDM7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
CFAP43Q8NDM7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
CFAP43Q8NDM7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC32.43■■■□□ 2.78
CFAP43Q8NDM7 RN7SL850P-201ENST00000579959 291 ntBASIC32.43■■■□□ 2.78
CFAP43Q8NDM7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
CFAP43Q8NDM7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC32.43■■■□□ 2.78
CFAP43Q8NDM7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC32.43■■■□□ 2.78
CFAP43Q8NDM7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC32.42■■■□□ 2.78
CFAP43Q8NDM7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC32.42■■■□□ 2.78
CFAP43Q8NDM7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC32.42■■■□□ 2.78
CFAP43Q8NDM7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC32.42■■■□□ 2.78
CFAP43Q8NDM7 AC133681.1-201ENST00000465482 601 ntBASIC32.42■■■□□ 2.78
CFAP43Q8NDM7 AC124016.1-201ENST00000609552 612 ntBASIC32.42■■■□□ 2.78
CFAP43Q8NDM7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
CFAP43Q8NDM7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CFAP43Q8NDM7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
CFAP43Q8NDM7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
CFAP43Q8NDM7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC32.41■■■□□ 2.78
CFAP43Q8NDM7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
CFAP43Q8NDM7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC32.41■■■□□ 2.78
CFAP43Q8NDM7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
CFAP43Q8NDM7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC32.41■■■□□ 2.78
CFAP43Q8NDM7 MIR4785-201ENST00000585005 73 ntBASIC32.41■■■□□ 2.78
CFAP43Q8NDM7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
CFAP43Q8NDM7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC32.41■■■□□ 2.78
CFAP43Q8NDM7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC32.41■■■□□ 2.78
CFAP43Q8NDM7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CFAP43Q8NDM7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
CFAP43Q8NDM7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CFAP43Q8NDM7 KRT17P2-201ENST00000300992 1314 ntBASIC32.4■■■□□ 2.78
CFAP43Q8NDM7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CFAP43Q8NDM7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CFAP43Q8NDM7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CFAP43Q8NDM7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC32.4■■■□□ 2.78
CFAP43Q8NDM7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
CFAP43Q8NDM7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
CFAP43Q8NDM7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC32.4■■■□□ 2.78
CFAP43Q8NDM7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CFAP43Q8NDM7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC32.4■■■□□ 2.78
CFAP43Q8NDM7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC32.4■■■□□ 2.78
CFAP43Q8NDM7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
CFAP43Q8NDM7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CFAP43Q8NDM7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
CFAP43Q8NDM7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CFAP43Q8NDM7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC32.39■■■□□ 2.78
CFAP43Q8NDM7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC32.39■■■□□ 2.78
CFAP43Q8NDM7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC32.39■■■□□ 2.78
CFAP43Q8NDM7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
CFAP43Q8NDM7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CFAP43Q8NDM7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC32.39■■■□□ 2.78
CFAP43Q8NDM7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.77
CFAP43Q8NDM7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.77
CFAP43Q8NDM7 AC087633.2-202ENST00000565166 1439 ntBASIC32.38■■■□□ 2.77
CFAP43Q8NDM7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CFAP43Q8NDM7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CFAP43Q8NDM7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CFAP43Q8NDM7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
CFAP43Q8NDM7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CFAP43Q8NDM7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC32.38■■■□□ 2.77
CFAP43Q8NDM7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC32.38■■■□□ 2.77
CFAP43Q8NDM7 AC105020.6-201ENST00000621523 1217 ntBASIC32.38■■■□□ 2.77
CFAP43Q8NDM7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CFAP43Q8NDM7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
CFAP43Q8NDM7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
CFAP43Q8NDM7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms