Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF7Q8N684 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF7Q8N684 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CPSF7Q8N684 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.07■□□□□ 0.8
CPSF7Q8N684 DUX4L2-201ENST00000561772 1275 ntBASIC20.07■□□□□ 0.8
CPSF7Q8N684 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.07■□□□□ 0.8
CPSF7Q8N684 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
CPSF7Q8N684 DUX4L6-201ENST00000626483 1275 ntBASIC20.07■□□□□ 0.8
CPSF7Q8N684 DUX4L1-201ENST00000627662 1275 ntBASIC20.07■□□□□ 0.8
CPSF7Q8N684 DUX4L8-201ENST00000629013 1275 ntBASIC20.07■□□□□ 0.8
CPSF7Q8N684 DUX4L3-201ENST00000630187 1275 ntBASIC20.07■□□□□ 0.8
CPSF7Q8N684 DUX4L7-201ENST00000630678 1275 ntBASIC20.07■□□□□ 0.8
CPSF7Q8N684 DUX4L5-201ENST00000630834 1275 ntBASIC20.07■□□□□ 0.8
CPSF7Q8N684 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.07■□□□□ 0.8
CPSF7Q8N684 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF7Q8N684 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF7Q8N684 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF7Q8N684 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF7Q8N684 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF7Q8N684 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF7Q8N684 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CPSF7Q8N684 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.06■□□□□ 0.8
CPSF7Q8N684 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF7Q8N684 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.06■□□□□ 0.8
CPSF7Q8N684 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF7Q8N684 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF7Q8N684 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.06■□□□□ 0.8
CPSF7Q8N684 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF7Q8N684 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF7Q8N684 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF7Q8N684 AC123595.1-201ENST00000440769 1046 ntBASIC20.06■□□□□ 0.8
CPSF7Q8N684 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF7Q8N684 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF7Q8N684 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.06■□□□□ 0.8
CPSF7Q8N684 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF7Q8N684 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF7Q8N684 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.06■□□□□ 0.8
CPSF7Q8N684 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF7Q8N684 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF7Q8N684 PCDHAC2-203ENST00000615316 3011 ntBASIC20.05■□□□□ 0.8
CPSF7Q8N684 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF7Q8N684 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF7Q8N684 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.05■□□□□ 0.8
CPSF7Q8N684 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF7Q8N684 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.05■□□□□ 0.8
CPSF7Q8N684 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF7Q8N684 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF7Q8N684 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF7Q8N684 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF7Q8N684 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF7Q8N684 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.05■□□□□ 0.8
CPSF7Q8N684 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.05■□□□□ 0.8
CPSF7Q8N684 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.05■□□□□ 0.8
CPSF7Q8N684 AC105233.4-201ENST00000642045 216 ntBASIC20.05■□□□□ 0.8
CPSF7Q8N684 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CPSF7Q8N684 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF7Q8N684 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF7Q8N684 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.05■□□□□ 0.8
CPSF7Q8N684 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF7Q8N684 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF7Q8N684 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF7Q8N684 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF7Q8N684 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPSF7Q8N684 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF7Q8N684 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF7Q8N684 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF7Q8N684 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF7Q8N684 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF7Q8N684 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.04■□□□□ 0.8
CPSF7Q8N684 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF7Q8N684 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF7Q8N684 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.04■□□□□ 0.8
CPSF7Q8N684 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CPSF7Q8N684 KRT18P5-201ENST00000436075 1291 ntBASIC20.04■□□□□ 0.8
CPSF7Q8N684 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF7Q8N684 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF7Q8N684 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.04■□□□□ 0.8
CPSF7Q8N684 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CPSF7Q8N684 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF7Q8N684 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPSF7Q8N684 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.04■□□□□ 0.8
CPSF7Q8N684 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CPSF7Q8N684 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.04■□□□□ 0.8
CPSF7Q8N684 AC099778.1-201ENST00000568593 1911 ntBASIC20.04■□□□□ 0.8
CPSF7Q8N684 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF7Q8N684 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF7Q8N684 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF7Q8N684 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF7Q8N684 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF7Q8N684 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF7Q8N684 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CPSF7Q8N684 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF7Q8N684 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF7Q8N684 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF7Q8N684 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF7Q8N684 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.03■□□□□ 0.8
CPSF7Q8N684 CCDC92B-201ENST00000575506 885 ntBASIC20.03■□□□□ 0.8
CPSF7Q8N684 SMUG1P1-201ENST00000590640 811 ntBASIC20.03■□□□□ 0.8
CPSF7Q8N684 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
CPSF7Q8N684 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms