Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC146Q8IYE0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC27.3■■□□□ 1.96
CCDC146Q8IYE0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC27.3■■□□□ 1.96
CCDC146Q8IYE0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
CCDC146Q8IYE0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC27.3■■□□□ 1.96
CCDC146Q8IYE0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
CCDC146Q8IYE0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC146Q8IYE0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC146Q8IYE0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC146Q8IYE0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC27.28■■□□□ 1.96
CCDC146Q8IYE0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
CCDC146Q8IYE0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC27.28■■□□□ 1.96
CCDC146Q8IYE0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
CCDC146Q8IYE0 CDV3P1-201ENST00000471403 739 ntBASIC27.28■■□□□ 1.96
CCDC146Q8IYE0 RARRES2P4-201ENST00000514074 484 ntBASIC27.28■■□□□ 1.96
CCDC146Q8IYE0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC27.28■■□□□ 1.96
CCDC146Q8IYE0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC146Q8IYE0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC146Q8IYE0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
CCDC146Q8IYE0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC146Q8IYE0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC146Q8IYE0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC146Q8IYE0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC27.27■■□□□ 1.96
CCDC146Q8IYE0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC27.27■■□□□ 1.96
CCDC146Q8IYE0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC27.27■■□□□ 1.96
CCDC146Q8IYE0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
CCDC146Q8IYE0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC146Q8IYE0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC146Q8IYE0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC146Q8IYE0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC146Q8IYE0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.96
CCDC146Q8IYE0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.96
CCDC146Q8IYE0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC146Q8IYE0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC27.26■■□□□ 1.95
CCDC146Q8IYE0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC146Q8IYE0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC27.26■■□□□ 1.95
CCDC146Q8IYE0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC27.26■■□□□ 1.95
CCDC146Q8IYE0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC27.26■■□□□ 1.95
CCDC146Q8IYE0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC146Q8IYE0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC146Q8IYE0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
CCDC146Q8IYE0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC146Q8IYE0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC27.26■■□□□ 1.95
CCDC146Q8IYE0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC146Q8IYE0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
CCDC146Q8IYE0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC27.26■■□□□ 1.95
CCDC146Q8IYE0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
CCDC146Q8IYE0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
CCDC146Q8IYE0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC27.25■■□□□ 1.95
CCDC146Q8IYE0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC27.25■■□□□ 1.95
CCDC146Q8IYE0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC146Q8IYE0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC27.25■■□□□ 1.95
CCDC146Q8IYE0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC27.25■■□□□ 1.95
CCDC146Q8IYE0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC146Q8IYE0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC27.25■■□□□ 1.95
CCDC146Q8IYE0 FAM21FP-204ENST00000608637 956 ntBASIC27.25■■□□□ 1.95
CCDC146Q8IYE0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC146Q8IYE0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC27.25■■□□□ 1.95
CCDC146Q8IYE0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC146Q8IYE0 AL121603.2-201ENST00000557373 2117 ntBASIC27.25■■□□□ 1.95
CCDC146Q8IYE0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC146Q8IYE0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC146Q8IYE0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC146Q8IYE0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC27.24■■□□□ 1.95
CCDC146Q8IYE0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC27.24■■□□□ 1.95
CCDC146Q8IYE0 AL355472.2-201ENST00000422958 438 ntBASIC27.24■■□□□ 1.95
CCDC146Q8IYE0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC27.24■■□□□ 1.95
CCDC146Q8IYE0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC27.24■■□□□ 1.95
CCDC146Q8IYE0 AL162412.1-201ENST00000567129 965 ntBASIC27.24■■□□□ 1.95
CCDC146Q8IYE0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC146Q8IYE0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC146Q8IYE0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
CCDC146Q8IYE0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
CCDC146Q8IYE0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC146Q8IYE0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC27.24■■□□□ 1.95
CCDC146Q8IYE0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC146Q8IYE0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC146Q8IYE0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC27.23■■□□□ 1.95
CCDC146Q8IYE0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC146Q8IYE0 SAPCD2P1-201ENST00000395413 1184 ntBASIC27.23■■□□□ 1.95
CCDC146Q8IYE0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC146Q8IYE0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC27.23■■□□□ 1.95
CCDC146Q8IYE0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
CCDC146Q8IYE0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms