Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.88■□□□□ 0.61
PTCHD4Q6ZW05 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 TSPY26P-201ENST00000476365 1326 ntBASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 AP001330.3-201ENST00000520123 633 ntBASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 AC027682.1-201ENST00000562846 899 ntBASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 AC112907.3-201ENST00000577781 2400 ntBASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 AC106739.1-201ENST00000617035 715 ntBASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.87■□□□□ 0.61
PTCHD4Q6ZW05 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PTCHD4Q6ZW05 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 AC110285.6-201ENST00000617652 491 ntBASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 AC105233.4-201ENST00000642045 216 ntBASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PTCHD4Q6ZW05 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.84■□□□□ 0.61
PTCHD4Q6ZW05 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTCHD4Q6ZW05 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.84■□□□□ 0.61
PTCHD4Q6ZW05 FP700111.2-201ENST00000619190 1892 ntBASIC18.84■□□□□ 0.61
PTCHD4Q6ZW05 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.84■□□□□ 0.61
PTCHD4Q6ZW05 AC055733.4-201ENST00000638462 1354 ntBASIC18.84■□□□□ 0.61
PTCHD4Q6ZW05 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTCHD4Q6ZW05 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PTCHD4Q6ZW05 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTCHD4Q6ZW05 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.84■□□□□ 0.61
PTCHD4Q6ZW05 AL512408.1-201ENST00000569378 2000 ntBASIC18.84■□□□□ 0.61
PTCHD4Q6ZW05 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTCHD4Q6ZW05 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTCHD4Q6ZW05 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTCHD4Q6ZW05 AC009237.3-201ENST00000393279 1427 ntBASIC18.83■□□□□ 0.61
PTCHD4Q6ZW05 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.83■□□□□ 0.61
PTCHD4Q6ZW05 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTCHD4Q6ZW05 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms