Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 AC027612.3-201ENST00000413684 1047 ntBASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM53Q6P2H8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 AFG3L1P-217ENST00000557444 2447 ntBASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 AC098818.2-201ENST00000564925 2320 ntBASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 BX323043.1-201ENST00000641006 1765 ntBASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM53Q6P2H8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM53Q6P2H8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 AC005224.4-201ENST00000583262 1652 ntBASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 AP006587.3-201ENST00000525742 1516 ntBASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM53Q6P2H8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms