Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 AC116562.4-201ENST00000641316 2276 ntBASIC19.73■□□□□ 0.75
RNF220Q5VTB9 AC112907.3-201ENST00000577781 2400 ntBASIC19.73■□□□□ 0.75
RNF220Q5VTB9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF220Q5VTB9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF220Q5VTB9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF220Q5VTB9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF220Q5VTB9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF220Q5VTB9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF220Q5VTB9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RNF220Q5VTB9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF220Q5VTB9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF220Q5VTB9 AC026471.6-201ENST00000622954 1905 ntBASIC19.72■□□□□ 0.75
RNF220Q5VTB9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 AC233992.3-201ENST00000607491 485 ntBASIC19.71■□□□□ 0.75
RNF220Q5VTB9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF220Q5VTB9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 AC008406.3-201ENST00000620001 1374 ntBASIC19.7■□□□□ 0.74
RNF220Q5VTB9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 AC133561.4-201ENST00000566112 224 ntBASIC19.7■□□□□ 0.74
RNF220Q5VTB9 AC104564.3-201ENST00000582367 638 ntBASIC19.7■□□□□ 0.74
RNF220Q5VTB9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RNF220Q5VTB9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 AP004607.7-201ENST00000527152 1677 ntBASIC19.69■□□□□ 0.74
RNF220Q5VTB9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF220Q5VTB9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF220Q5VTB9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF220Q5VTB9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RNF220Q5VTB9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF220Q5VTB9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF220Q5VTB9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF220Q5VTB9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF220Q5VTB9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF220Q5VTB9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF220Q5VTB9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF220Q5VTB9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF220Q5VTB9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF220Q5VTB9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF220Q5VTB9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF220Q5VTB9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF220Q5VTB9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF220Q5VTB9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms