Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TTC39AQ5SRH9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.09■■□□□ 1.61
TTC39AQ5SRH9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
TTC39AQ5SRH9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TTC39AQ5SRH9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC25.09■■□□□ 1.61
TTC39AQ5SRH9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TTC39AQ5SRH9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC25.09■■□□□ 1.61
TTC39AQ5SRH9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC25.09■■□□□ 1.61
TTC39AQ5SRH9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC25.09■■□□□ 1.61
TTC39AQ5SRH9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
TTC39AQ5SRH9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC25.09■■□□□ 1.61
TTC39AQ5SRH9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
TTC39AQ5SRH9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TTC39AQ5SRH9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TTC39AQ5SRH9 AC011484.1-201ENST00000377652 1995 ntBASIC25.09■■□□□ 1.61
TTC39AQ5SRH9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC25.09■■□□□ 1.61
TTC39AQ5SRH9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.08■■□□□ 1.61
TTC39AQ5SRH9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TTC39AQ5SRH9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.08■■□□□ 1.61
TTC39AQ5SRH9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TTC39AQ5SRH9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
TTC39AQ5SRH9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TTC39AQ5SRH9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC25.08■■□□□ 1.61
TTC39AQ5SRH9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
TTC39AQ5SRH9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
TTC39AQ5SRH9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TTC39AQ5SRH9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC25.08■■□□□ 1.61
TTC39AQ5SRH9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC25.08■■□□□ 1.61
TTC39AQ5SRH9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.6
TTC39AQ5SRH9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
TTC39AQ5SRH9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TTC39AQ5SRH9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TTC39AQ5SRH9 KRT18P68-201ENST00000392293 1000 ntBASIC25.07■■□□□ 1.6
TTC39AQ5SRH9 SERPINH1P1-201ENST00000419794 1249 ntBASIC25.07■■□□□ 1.6
TTC39AQ5SRH9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.07■■□□□ 1.6
TTC39AQ5SRH9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC25.07■■□□□ 1.6
TTC39AQ5SRH9 OR2A1-AS1-201ENST00000462305 773 ntBASIC25.07■■□□□ 1.6
TTC39AQ5SRH9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC25.07■■□□□ 1.6
TTC39AQ5SRH9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC25.07■■□□□ 1.6
TTC39AQ5SRH9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC25.07■■□□□ 1.6
TTC39AQ5SRH9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TTC39AQ5SRH9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TTC39AQ5SRH9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
TTC39AQ5SRH9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
TTC39AQ5SRH9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC25.06■■□□□ 1.6
TTC39AQ5SRH9 DUSP5P2-201ENST00000426873 1033 ntBASIC25.06■■□□□ 1.6
TTC39AQ5SRH9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC25.06■■□□□ 1.6
TTC39AQ5SRH9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC25.06■■□□□ 1.6
TTC39AQ5SRH9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC25.06■■□□□ 1.6
TTC39AQ5SRH9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.06■■□□□ 1.6
TTC39AQ5SRH9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC25.06■■□□□ 1.6
TTC39AQ5SRH9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.05■■□□□ 1.6
TTC39AQ5SRH9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TTC39AQ5SRH9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TTC39AQ5SRH9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.05■■□□□ 1.6
TTC39AQ5SRH9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.05■■□□□ 1.6
TTC39AQ5SRH9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.05■■□□□ 1.6
TTC39AQ5SRH9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TTC39AQ5SRH9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC25.05■■□□□ 1.6
TTC39AQ5SRH9 AC091874.3-201ENST00000512672 1195 ntBASIC25.05■■□□□ 1.6
TTC39AQ5SRH9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC25.05■■□□□ 1.6
TTC39AQ5SRH9 AL589743.5-201ENST00000616611 1050 ntBASIC25.05■■□□□ 1.6
TTC39AQ5SRH9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC25.05■■□□□ 1.6
TTC39AQ5SRH9 AC121338.2-201ENST00000622535 1744 ntBASIC25.05■■□□□ 1.6
TTC39AQ5SRH9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.05■■□□□ 1.6
TTC39AQ5SRH9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TTC39AQ5SRH9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TTC39AQ5SRH9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 KRT18P6-201ENST00000555540 1265 ntBASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
TTC39AQ5SRH9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TTC39AQ5SRH9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC25.03■■□□□ 1.6
TTC39AQ5SRH9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TTC39AQ5SRH9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TTC39AQ5SRH9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
TTC39AQ5SRH9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
TTC39AQ5SRH9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC25.03■■□□□ 1.6
TTC39AQ5SRH9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC25.03■■□□□ 1.6
TTC39AQ5SRH9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC25.03■■□□□ 1.6
TTC39AQ5SRH9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25.03■■□□□ 1.6
TTC39AQ5SRH9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms