Protein–RNA interactions for Protein: Q5RKV6

EXOSC6, Exosome complex component MTR3, humanhuman

Known RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC6Q5RKV6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.08■□□□□ 0.64
EXOSC6Q5RKV6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
EXOSC6Q5RKV6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
EXOSC6Q5RKV6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
EXOSC6Q5RKV6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 AC073314.1-201ENST00000568729 2216 ntBASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 AC007322.3-201ENST00000426526 701 ntBASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 AC137761.2-201ENST00000561729 223 ntBASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 AC145350.3-201ENST00000569033 163 ntBASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 MIR2861-201ENST00000636310 90 ntBASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 LINC01521-201ENST00000504184 1943 ntBASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
EXOSC6Q5RKV6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
EXOSC6Q5RKV6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.06■□□□□ 0.64
EXOSC6Q5RKV6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC6Q5RKV6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC6Q5RKV6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC6Q5RKV6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC6Q5RKV6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.06■□□□□ 0.64
EXOSC6Q5RKV6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.06■□□□□ 0.64
EXOSC6Q5RKV6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC6Q5RKV6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC6Q5RKV6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.06■□□□□ 0.64
EXOSC6Q5RKV6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC6Q5RKV6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC6Q5RKV6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
EXOSC6Q5RKV6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EXOSC6Q5RKV6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 AL162412.1-201ENST00000567129 965 ntBASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.05■□□□□ 0.64
EXOSC6Q5RKV6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 AL121603.2-201ENST00000557373 2117 ntBASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 CNN2P6-201ENST00000439038 900 ntBASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 DUX4L16-201ENST00000555130 1264 ntBASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 FP700111.2-201ENST00000619190 1892 ntBASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EXOSC6Q5RKV6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms