Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
USH1GQ495M9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USH1GQ495M9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USH1GQ495M9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USH1GQ495M9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
USH1GQ495M9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.67■■□□□ 1.38
USH1GQ495M9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.67■■□□□ 1.38
USH1GQ495M9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
USH1GQ495M9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.67■■□□□ 1.38
USH1GQ495M9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USH1GQ495M9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
USH1GQ495M9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.67■■□□□ 1.38
USH1GQ495M9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USH1GQ495M9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USH1GQ495M9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USH1GQ495M9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.66■■□□□ 1.38
USH1GQ495M9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.66■■□□□ 1.38
USH1GQ495M9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USH1GQ495M9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.66■■□□□ 1.38
USH1GQ495M9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.66■■□□□ 1.38
USH1GQ495M9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
USH1GQ495M9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USH1GQ495M9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
USH1GQ495M9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USH1GQ495M9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
USH1GQ495M9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USH1GQ495M9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USH1GQ495M9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USH1GQ495M9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
USH1GQ495M9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
USH1GQ495M9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
USH1GQ495M9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USH1GQ495M9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USH1GQ495M9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USH1GQ495M9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USH1GQ495M9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.65■■□□□ 1.38
USH1GQ495M9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
USH1GQ495M9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.65■■□□□ 1.38
USH1GQ495M9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.65■■□□□ 1.38
USH1GQ495M9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
USH1GQ495M9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.65■■□□□ 1.38
USH1GQ495M9 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.65■■□□□ 1.38
USH1GQ495M9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USH1GQ495M9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.64■■□□□ 1.38
USH1GQ495M9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
USH1GQ495M9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
USH1GQ495M9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
USH1GQ495M9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
USH1GQ495M9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
USH1GQ495M9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
USH1GQ495M9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
USH1GQ495M9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
USH1GQ495M9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
USH1GQ495M9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
USH1GQ495M9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
USH1GQ495M9 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.64■■□□□ 1.37
USH1GQ495M9 FAM201B-201ENST00000458407 597 ntBASIC23.64■■□□□ 1.37
USH1GQ495M9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
USH1GQ495M9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.64■■□□□ 1.37
USH1GQ495M9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
USH1GQ495M9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
USH1GQ495M9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
USH1GQ495M9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
USH1GQ495M9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
USH1GQ495M9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.64■■□□□ 1.37
USH1GQ495M9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
USH1GQ495M9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
USH1GQ495M9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
USH1GQ495M9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
USH1GQ495M9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
USH1GQ495M9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
USH1GQ495M9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.63■■□□□ 1.37
USH1GQ495M9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.63■■□□□ 1.37
USH1GQ495M9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.63■■□□□ 1.37
USH1GQ495M9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
USH1GQ495M9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.63■■□□□ 1.37
USH1GQ495M9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
USH1GQ495M9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
USH1GQ495M9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
USH1GQ495M9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
USH1GQ495M9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
USH1GQ495M9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
USH1GQ495M9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
USH1GQ495M9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.63■■□□□ 1.37
USH1GQ495M9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
USH1GQ495M9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
USH1GQ495M9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.63■■□□□ 1.37
USH1GQ495M9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.63■■□□□ 1.37
USH1GQ495M9 TMEM191A-211ENST00000637163 1067 ntBASIC23.63■■□□□ 1.37
USH1GQ495M9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.63■■□□□ 1.37
USH1GQ495M9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
USH1GQ495M9 AF106564.1-201ENST00000607058 2553 ntBASIC23.62■■□□□ 1.37
USH1GQ495M9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
USH1GQ495M9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
USH1GQ495M9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
USH1GQ495M9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.62■■□□□ 1.37
USH1GQ495M9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.62■■□□□ 1.37
USH1GQ495M9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
USH1GQ495M9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
USH1GQ495M9 AC105020.6-201ENST00000621523 1217 ntBASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms