Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
CCDC144BQ3MJ40 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.86■■□□□ 1.41
CCDC144BQ3MJ40 RBM17P2-201ENST00000616397 1405 ntBASIC23.85■■□□□ 1.41
CCDC144BQ3MJ40 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.85■■□□□ 1.41
CCDC144BQ3MJ40 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC144BQ3MJ40 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC144BQ3MJ40 KRT18P29-201ENST00000397031 1267 ntBASIC23.85■■□□□ 1.41
CCDC144BQ3MJ40 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CCDC144BQ3MJ40 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC144BQ3MJ40 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.85■■□□□ 1.41
CCDC144BQ3MJ40 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.85■■□□□ 1.41
CCDC144BQ3MJ40 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC144BQ3MJ40 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC144BQ3MJ40 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC144BQ3MJ40 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.84■■□□□ 1.41
CCDC144BQ3MJ40 KRT16P2-201ENST00000414673 1423 ntBASIC23.84■■□□□ 1.41
CCDC144BQ3MJ40 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC144BQ3MJ40 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC144BQ3MJ40 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC144BQ3MJ40 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CCDC144BQ3MJ40 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC144BQ3MJ40 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CCDC144BQ3MJ40 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC144BQ3MJ40 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC144BQ3MJ40 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.84■■□□□ 1.41
CCDC144BQ3MJ40 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC144BQ3MJ40 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC144BQ3MJ40 AC083880.1-201ENST00000608266 535 ntBASIC23.84■■□□□ 1.41
CCDC144BQ3MJ40 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC144BQ3MJ40 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
CCDC144BQ3MJ40 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC144BQ3MJ40 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC144BQ3MJ40 AC093827.2-201ENST00000512654 315 ntBASIC23.83■■□□□ 1.41
CCDC144BQ3MJ40 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
CCDC144BQ3MJ40 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.83■■□□□ 1.41
CCDC144BQ3MJ40 AL591742.1-201ENST00000604433 565 ntBASIC23.83■■□□□ 1.41
CCDC144BQ3MJ40 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.83■■□□□ 1.41
CCDC144BQ3MJ40 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC144BQ3MJ40 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.83■■□□□ 1.41
CCDC144BQ3MJ40 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC144BQ3MJ40 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.83■■□□□ 1.41
CCDC144BQ3MJ40 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.83■■□□□ 1.41
CCDC144BQ3MJ40 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC144BQ3MJ40 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.83■■□□□ 1.4
CCDC144BQ3MJ40 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC144BQ3MJ40 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 AL162412.1-201ENST00000567129 965 ntBASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 MYC-209ENST00000641252 345 ntBASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.82■■□□□ 1.4
CCDC144BQ3MJ40 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 PRORSD1P-201ENST00000295112 541 ntBASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 AC010980.2-201ENST00000587099 1412 ntBASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 AC061975.6-201ENST00000579045 1553 ntBASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144BQ3MJ40 LINC01521-201ENST00000504184 1943 ntBASIC23.8■■□□□ 1.4
CCDC144BQ3MJ40 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144BQ3MJ40 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144BQ3MJ40 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144BQ3MJ40 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144BQ3MJ40 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144BQ3MJ40 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC144BQ3MJ40 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144BQ3MJ40 AC097658.1-201ENST00000475555 843 ntBASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms