Protein–RNA interactions for Protein: Q38SD2

LRRK1, Leucine-rich repeat serine/threonine-protein kinase 1, humanhuman

Predictions only

Length 2,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1Q38SD2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK1Q38SD2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK1Q38SD2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.42■□□□□ 0.86
LRRK1Q38SD2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK1Q38SD2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
LRRK1Q38SD2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
LRRK1Q38SD2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK1Q38SD2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRK1Q38SD2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK1Q38SD2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK1Q38SD2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK1Q38SD2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRK1Q38SD2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK1Q38SD2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
LRRK1Q38SD2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRK1Q38SD2 AC060766.5-201ENST00000590539 871 ntBASIC20.41■□□□□ 0.86
LRRK1Q38SD2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRK1Q38SD2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRK1Q38SD2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LRRK1Q38SD2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRK1Q38SD2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRK1Q38SD2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRK1Q38SD2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.41■□□□□ 0.86
LRRK1Q38SD2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRK1Q38SD2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.41■□□□□ 0.86
LRRK1Q38SD2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LRRK1Q38SD2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.41■□□□□ 0.86
LRRK1Q38SD2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRK1Q38SD2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRK1Q38SD2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.41■□□□□ 0.86
LRRK1Q38SD2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.41■□□□□ 0.86
LRRK1Q38SD2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK1Q38SD2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRRK1Q38SD2 LSM12P1-201ENST00000411836 588 ntBASIC20.39■□□□□ 0.86
LRRK1Q38SD2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.39■□□□□ 0.86
LRRK1Q38SD2 AC008403.3-201ENST00000598924 454 ntBASIC20.39■□□□□ 0.86
LRRK1Q38SD2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.39■□□□□ 0.86
LRRK1Q38SD2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.39■□□□□ 0.86
LRRK1Q38SD2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRRK1Q38SD2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRRK1Q38SD2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRK1Q38SD2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRK1Q38SD2 AL049796.1-201ENST00000565336 1766 ntBASIC20.39■□□□□ 0.85
LRRK1Q38SD2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LRRK1Q38SD2 TSPY20P-201ENST00000450910 630 ntBASIC20.39■□□□□ 0.85
LRRK1Q38SD2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.39■□□□□ 0.85
LRRK1Q38SD2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRK1Q38SD2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRK1Q38SD2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRK1Q38SD2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.38■□□□□ 0.85
LRRK1Q38SD2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRK1Q38SD2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LRRK1Q38SD2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LRRK1Q38SD2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRK1Q38SD2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.38■□□□□ 0.85
LRRK1Q38SD2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRK1Q38SD2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRK1Q38SD2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
LRRK1Q38SD2 PNMA6B-201ENST00000538162 1200 ntBASIC20.37■□□□□ 0.85
LRRK1Q38SD2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.37■□□□□ 0.85
LRRK1Q38SD2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRK1Q38SD2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRK1Q38SD2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRK1Q38SD2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
LRRK1Q38SD2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRK1Q38SD2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRK1Q38SD2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRK1Q38SD2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRK1Q38SD2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRK1Q38SD2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRK1Q38SD2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LRRK1Q38SD2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LRRK1Q38SD2 PGM5P4-201ENST00000421970 445 ntBASIC20.36■□□□□ 0.85
LRRK1Q38SD2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
LRRK1Q38SD2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LRRK1Q38SD2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRK1Q38SD2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRK1Q38SD2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRK1Q38SD2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRK1Q38SD2 KRT18P68-201ENST00000392293 1000 ntBASIC20.36■□□□□ 0.85
LRRK1Q38SD2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRK1Q38SD2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRK1Q38SD2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRK1Q38SD2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms