Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 MFSD11-216ENST00000590393 1141 ntBASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 AC080038.1-201ENST00000611274 1154 ntBASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 SLC25A24-204ENST00000569674 2357 ntBASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RASGEF1BQ0VAM2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.64■□□□□ 0.58
RASGEF1BQ0VAM2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
RASGEF1BQ0VAM2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RASGEF1BQ0VAM2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 LINC01521-201ENST00000504184 1943 ntBASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 AC010536.3-201ENST00000620306 533 ntBASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RASGEF1BQ0VAM2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RASGEF1BQ0VAM2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.61■□□□□ 0.57
RASGEF1BQ0VAM2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RASGEF1BQ0VAM2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RASGEF1BQ0VAM2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RASGEF1BQ0VAM2 AL049796.1-201ENST00000565336 1766 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms