Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 snR5snR5 204 nt2.28□□□□□ -2.04
DDC1Q08949 YFH1YDL120W 525 nt2.28□□□□□ -2.04
DDC1Q08949 GCN4YEL009C 846 nt2.28□□□□□ -2.04
DDC1Q08949 PRP38YGR075C 729 nt2.28□□□□□ -2.04
DDC1Q08949 VPS63YLR261C 327 nt2.28□□□□□ -2.04
DDC1Q08949 YMR254CYMR254C 309 nt2.28□□□□□ -2.04
DDC1Q08949 YPR170CYPR170C 336 nt2.28□□□□□ -2.04
DDC1Q08949 MUD1YBR119W 897 nt2.28□□□□□ -2.04
DDC1Q08949 SSE1YPL106C 2082 nt2.28□□□□□ -2.04
DDC1Q08949 ALY1YKR021W 2748 nt2.28□□□□□ -2.04
DDC1Q08949 TFC3YAL001C 3483 nt2.28□□□□□ -2.04
DDC1Q08949 IRA2YOL081W 9240 nt2.28□□□□□ -2.04
DDC1Q08949 UTP15YMR093W 1542 nt2.27□□□□□ -2.05
DDC1Q08949 TOF1YNL273W 3717 nt2.27□□□□□ -2.05
DDC1Q08949 YFL002W-BYFL002W-B 1317 nt2.27□□□□□ -2.05
DDC1Q08949 YGR161W-AYGR161W-A 1317 nt2.27□□□□□ -2.05
DDC1Q08949 YBL100W-AYBL100W-A 1317 nt2.27□□□□□ -2.05
DDC1Q08949 YCL020WYCL020W 1317 nt2.27□□□□□ -2.05
DDC1Q08949 NOP19YGR251W 591 nt2.27□□□□□ -2.05
DDC1Q08949 YKL165C-AYKL165C-A 234 nt2.27□□□□□ -2.05
DDC1Q08949 ATG38YLR211C 681 nt2.27□□□□□ -2.05
DDC1Q08949 COX8YLR395C 237 nt2.27□□□□□ -2.05
DDC1Q08949 CSI1YMR025W 888 nt2.27□□□□□ -2.05
DDC1Q08949 RPS16AYMR143W 432 nt2.27□□□□□ -2.05
DDC1Q08949 GIM3YNL153C 390 nt2.27□□□□□ -2.05
DDC1Q08949 YOL029CYOL029C 606 nt2.27□□□□□ -2.05
DDC1Q08949 ALG14YBR070C 714 nt2.27□□□□□ -2.05
DDC1Q08949 JID1YPR061C 906 nt2.27□□□□□ -2.05
DDC1Q08949 INP53YOR109W 3324 nt2.27□□□□□ -2.05
DDC1Q08949 FUS1YCL027W 1539 nt2.27□□□□□ -2.05
DDC1Q08949 BFR1YOR198C 1413 nt2.26□□□□□ -2.05
DDC1Q08949 NPR3YHL023C 3441 nt2.26□□□□□ -2.05
DDC1Q08949 UBX3YDL091C 1368 nt2.26□□□□□ -2.05
DDC1Q08949 MFB1YDR219C 1398 nt2.26□□□□□ -2.05
DDC1Q08949 TMA20YER007C-A 546 nt2.26□□□□□ -2.05
DDC1Q08949 YHR052W-AYHR052W-A 195 nt2.26□□□□□ -2.05
DDC1Q08949 YHR054W-AYHR054W-A 195 nt2.26□□□□□ -2.05
DDC1Q08949 YIR020C-BYIR020C-B 735 nt2.26□□□□□ -2.05
DDC1Q08949 YJL119CYJL119C 324 nt2.26□□□□□ -2.05
DDC1Q08949 YJR087WYJR087W 351 nt2.26□□□□□ -2.05
DDC1Q08949 ECM9YKR004C 1134 nt2.26□□□□□ -2.05
DDC1Q08949 NYV1YLR093C 762 nt2.26□□□□□ -2.05
DDC1Q08949 15S_rRNA15S_rRNA 1649 nt2.26□□□□□ -2.05
DDC1Q08949 SSQ1YLR369W 1974 nt2.26□□□□□ -2.05
DDC1Q08949 UTP22YGR090W 3714 nt2.26□□□□□ -2.05
DDC1Q08949 MLH1YMR167W 2310 nt2.25□□□□□ -2.05
DDC1Q08949 GCV2YMR189W 3105 nt2.25□□□□□ -2.05
DDC1Q08949 PET191YJR034W 327 nt2.25□□□□□ -2.05
DDC1Q08949 COQ10YOL008W 624 nt2.25□□□□□ -2.05
DDC1Q08949 ALK2YBL009W 2031 nt2.25□□□□□ -2.05
DDC1Q08949 TRZ1YKR079C 2517 nt2.25□□□□□ -2.05
DDC1Q08949 SPF1YEL031W 3648 nt2.24□□□□□ -2.05
DDC1Q08949 DAD1YDR016C 285 nt2.24□□□□□ -2.05
DDC1Q08949 YDR018CYDR018C 1191 nt2.24□□□□□ -2.05
DDC1Q08949 OCA6YDR067C 675 nt2.24□□□□□ -2.05
DDC1Q08949 YDR115WYDR115W 318 nt2.24□□□□□ -2.05
DDC1Q08949 BRP1YGL007W 378 nt2.24□□□□□ -2.05
DDC1Q08949 CKA1YIL035C 1119 nt2.24□□□□□ -2.05
DDC1Q08949 BUD19YJL188C 309 nt2.24□□□□□ -2.05
DDC1Q08949 SRP21YKL122C 504 nt2.24□□□□□ -2.05
DDC1Q08949 YOL085W-AYOL085W-A 213 nt2.24□□□□□ -2.05
DDC1Q08949 RSA1YPL193W 1146 nt2.24□□□□□ -2.05
DDC1Q08949 COG3YER157W 2406 nt2.24□□□□□ -2.05
DDC1Q08949 SCY1YGL083W 2415 nt2.24□□□□□ -2.05
DDC1Q08949 DNL4YOR005C 2835 nt2.24□□□□□ -2.05
DDC1Q08949 RLF2YPR018W 1821 nt2.24□□□□□ -2.05
DDC1Q08949 SWA2YDR320C 2007 nt2.24□□□□□ -2.05
DDC1Q08949 YBT1YLL048C 4986 nt2.23□□□□□ -2.05
DDC1Q08949 NEL1YHR035W 1893 nt2.23□□□□□ -2.05
DDC1Q08949 NCS2YNL119W 1482 nt2.23□□□□□ -2.05
DDC1Q08949 snR9snR9 187 nt2.23□□□□□ -2.05
DDC1Q08949 YDR461C-AYDR461C-A 243 nt2.23□□□□□ -2.05
DDC1Q08949 RTS3YGR161C 792 nt2.23□□□□□ -2.05
DDC1Q08949 YHR180W-AYHR180W-A 183 nt2.23□□□□□ -2.05
DDC1Q08949 YMR173W-AYMR173W-A 1185 nt2.23□□□□□ -2.05
DDC1Q08949 FPR1YNL135C 345 nt2.23□□□□□ -2.05
DDC1Q08949 YNR034W-AYNR034W-A 297 nt2.23□□□□□ -2.05
DDC1Q08949 ESF2YNR054C 951 nt2.23□□□□□ -2.05
DDC1Q08949 SFM1YOR021C 642 nt2.23□□□□□ -2.05
DDC1Q08949 DAD3YBR233W-A 285 nt2.23□□□□□ -2.05
DDC1Q08949 RGA1YOR127W 3024 nt2.23□□□□□ -2.05
DDC1Q08949 DNF1YER166W 4716 nt2.23□□□□□ -2.05
DDC1Q08949 CTF13YMR094W 1437 nt2.23□□□□□ -2.05
DDC1Q08949 PUF4YGL014W 2667 nt2.23□□□□□ -2.05
DDC1Q08949 VPS13YLL040C 9435 nt2.23□□□□□ -2.05
DDC1Q08949 SIP3YNL257C 3690 nt2.22□□□□□ -2.05
DDC1Q08949 NCB2YDR397C 441 nt2.22□□□□□ -2.05
DDC1Q08949 GPI19YDR437W 423 nt2.22□□□□□ -2.05
DDC1Q08949 TDA2YER071C 381 nt2.22□□□□□ -2.05
DDC1Q08949 PEX4YGR133W 552 nt2.22□□□□□ -2.05
DDC1Q08949 YJL086CYJL086C 369 nt2.22□□□□□ -2.05
DDC1Q08949 YAP7YOL028C 738 nt2.22□□□□□ -2.05
DDC1Q08949 YOL134CYOL134C 390 nt2.22□□□□□ -2.05
DDC1Q08949 ISU1YPL135W 498 nt2.22□□□□□ -2.05
DDC1Q08949 CSM4YPL200W 471 nt2.22□□□□□ -2.05
DDC1Q08949 Q0017Q0017 162 nt2.22□□□□□ -2.05
DDC1Q08949 HRD3YLR207W 2502 nt2.22□□□□□ -2.05
DDC1Q08949 UBP16YPL072W 1500 nt2.22□□□□□ -2.05
DDC1Q08949 PUT3YKL015W 2940 nt2.21□□□□□ -2.05
DDC1Q08949 DAL5YJR152W 1632 nt2.21□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 83.2 ms