Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GABREP78334 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.6■□□□□ 0.73
GABREP78334 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
GABREP78334 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GABREP78334 AC233723.2-201ENST00000623798 2106 ntBASIC19.6■□□□□ 0.73
GABREP78334 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
GABREP78334 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GABREP78334 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GABREP78334 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GABREP78334 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GABREP78334 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.6■□□□□ 0.73
GABREP78334 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
GABREP78334 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.6■□□□□ 0.73
GABREP78334 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
GABREP78334 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
GABREP78334 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
GABREP78334 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GABREP78334 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.6■□□□□ 0.73
GABREP78334 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GABREP78334 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GABREP78334 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GABREP78334 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GABREP78334 AC239809.2-201ENST00000415381 517 ntBASIC19.59■□□□□ 0.73
GABREP78334 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.59■□□□□ 0.73
GABREP78334 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GABREP78334 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.59■□□□□ 0.73
GABREP78334 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
GABREP78334 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.59■□□□□ 0.73
GABREP78334 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GABREP78334 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.59■□□□□ 0.73
GABREP78334 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.59■□□□□ 0.73
GABREP78334 AL023875.1-201ENST00000640777 796 ntBASIC19.59■□□□□ 0.73
GABREP78334 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
GABREP78334 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
GABREP78334 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
GABREP78334 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
GABREP78334 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GABREP78334 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GABREP78334 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GABREP78334 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GABREP78334 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GABREP78334 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GABREP78334 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GABREP78334 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GABREP78334 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABREP78334 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABREP78334 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GABREP78334 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.58■□□□□ 0.72
GABREP78334 MTDHP1-201ENST00000605323 784 ntBASIC19.58■□□□□ 0.72
GABREP78334 AP001412.1-201ENST00000608405 714 ntBASIC19.58■□□□□ 0.72
GABREP78334 AC124016.1-201ENST00000609552 612 ntBASIC19.58■□□□□ 0.72
GABREP78334 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABREP78334 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABREP78334 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABREP78334 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABREP78334 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.58■□□□□ 0.72
GABREP78334 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
GABREP78334 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
GABREP78334 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GABREP78334 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GABREP78334 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GABREP78334 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GABREP78334 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
GABREP78334 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GABREP78334 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GABREP78334 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.57■□□□□ 0.72
GABREP78334 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.57■□□□□ 0.72
GABREP78334 AC026471.6-201ENST00000622954 1905 ntBASIC19.57■□□□□ 0.72
GABREP78334 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
GABREP78334 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.57■□□□□ 0.72
GABREP78334 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.57■□□□□ 0.72
GABREP78334 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.57■□□□□ 0.72
GABREP78334 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GABREP78334 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.57■□□□□ 0.72
GABREP78334 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.57■□□□□ 0.72
GABREP78334 C2orf69P4-201ENST00000565394 541 ntBASIC19.57■□□□□ 0.72
GABREP78334 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
GABREP78334 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
GABREP78334 AL049637.2-201ENST00000641778 930 ntBASIC19.57■□□□□ 0.72
GABREP78334 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
GABREP78334 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
GABREP78334 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.57■□□□□ 0.72
GABREP78334 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.57■□□□□ 0.72
GABREP78334 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GABREP78334 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GABREP78334 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GABREP78334 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.56■□□□□ 0.72
GABREP78334 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
GABREP78334 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GABREP78334 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GABREP78334 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GABREP78334 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GABREP78334 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GABREP78334 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GABREP78334 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.56■□□□□ 0.72
GABREP78334 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
GABREP78334 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.56■□□□□ 0.72
GABREP78334 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.56■□□□□ 0.72
GABREP78334 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
GABREP78334 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms