Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EIF3EP60228 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EIF3EP60228 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.22■□□□□ 0.99
EIF3EP60228 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.22■□□□□ 0.99
EIF3EP60228 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EIF3EP60228 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
EIF3EP60228 AC004854.2-201ENST00000608450 1441 ntBASIC21.21■□□□□ 0.99
EIF3EP60228 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EIF3EP60228 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EIF3EP60228 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EIF3EP60228 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EIF3EP60228 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.21■□□□□ 0.99
EIF3EP60228 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EIF3EP60228 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.21■□□□□ 0.99
EIF3EP60228 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
EIF3EP60228 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
EIF3EP60228 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
EIF3EP60228 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
EIF3EP60228 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
EIF3EP60228 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.2■□□□□ 0.98
EIF3EP60228 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
EIF3EP60228 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EIF3EP60228 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.2■□□□□ 0.98
EIF3EP60228 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EIF3EP60228 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EIF3EP60228 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.2■□□□□ 0.98
EIF3EP60228 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
EIF3EP60228 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.2■□□□□ 0.98
EIF3EP60228 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EIF3EP60228 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EIF3EP60228 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
EIF3EP60228 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EIF3EP60228 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EIF3EP60228 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.19■□□□□ 0.98
EIF3EP60228 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
EIF3EP60228 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.19■□□□□ 0.98
EIF3EP60228 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
EIF3EP60228 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
EIF3EP60228 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
EIF3EP60228 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.19■□□□□ 0.98
EIF3EP60228 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.19■□□□□ 0.98
EIF3EP60228 KRT18P20-201ENST00000548986 1279 ntBASIC21.19■□□□□ 0.98
EIF3EP60228 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
EIF3EP60228 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.19■□□□□ 0.98
EIF3EP60228 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.19■□□□□ 0.98
EIF3EP60228 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
EIF3EP60228 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
EIF3EP60228 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EIF3EP60228 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.19■□□□□ 0.98
EIF3EP60228 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EIF3EP60228 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EIF3EP60228 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
EIF3EP60228 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EIF3EP60228 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EIF3EP60228 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EIF3EP60228 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.18■□□□□ 0.98
EIF3EP60228 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EIF3EP60228 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
EIF3EP60228 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EIF3EP60228 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EIF3EP60228 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EIF3EP60228 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EIF3EP60228 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EIF3EP60228 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EIF3EP60228 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EIF3EP60228 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EIF3EP60228 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
EIF3EP60228 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EIF3EP60228 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.18■□□□□ 0.98
EIF3EP60228 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.18■□□□□ 0.98
EIF3EP60228 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
EIF3EP60228 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EIF3EP60228 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EIF3EP60228 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EIF3EP60228 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
EIF3EP60228 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
EIF3EP60228 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.17■□□□□ 0.98
EIF3EP60228 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EIF3EP60228 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
EIF3EP60228 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.17■□□□□ 0.98
EIF3EP60228 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EIF3EP60228 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.17■□□□□ 0.98
EIF3EP60228 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EIF3EP60228 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EIF3EP60228 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.17■□□□□ 0.98
EIF3EP60228 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.17■□□□□ 0.98
EIF3EP60228 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
EIF3EP60228 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.17■□□□□ 0.98
EIF3EP60228 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
EIF3EP60228 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.17■□□□□ 0.98
EIF3EP60228 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EIF3EP60228 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
EIF3EP60228 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EIF3EP60228 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EIF3EP60228 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EIF3EP60228 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EIF3EP60228 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EIF3EP60228 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EIF3EP60228 AL121603.2-201ENST00000557373 2117 ntBASIC21.16■□□□□ 0.98
EIF3EP60228 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms