Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL354811.1-201ENST00000610286 706 ntBASIC19.13■□□□□ 0.65
CDH12P55289 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH12P55289 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH12P55289 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDH12P55289 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.13■□□□□ 0.65
CDH12P55289 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH12P55289 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH12P55289 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDH12P55289 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CDH12P55289 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.12■□□□□ 0.65
CDH12P55289 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CDH12P55289 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH12P55289 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.12■□□□□ 0.65
CDH12P55289 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CDH12P55289 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CDH12P55289 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CDH12P55289 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH12P55289 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH12P55289 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH12P55289 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH12P55289 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH12P55289 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDH12P55289 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH12P55289 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.12■□□□□ 0.65
CDH12P55289 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.12■□□□□ 0.65
CDH12P55289 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH12P55289 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH12P55289 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH12P55289 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDH12P55289 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.12■□□□□ 0.65
CDH12P55289 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CDH12P55289 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH12P55289 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH12P55289 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH12P55289 AC007952.6-201ENST00000573168 2673 ntBASIC19.11■□□□□ 0.65
CDH12P55289 AC003957.1-201ENST00000625108 2673 ntBASIC19.11■□□□□ 0.65
CDH12P55289 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH12P55289 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH12P55289 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH12P55289 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH12P55289 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH12P55289 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH12P55289 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH12P55289 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH12P55289 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.11■□□□□ 0.65
CDH12P55289 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.11■□□□□ 0.65
CDH12P55289 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDH12P55289 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.11■□□□□ 0.65
CDH12P55289 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.11■□□□□ 0.65
CDH12P55289 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.11■□□□□ 0.65
CDH12P55289 TPRG1LP1-201ENST00000598702 760 ntBASIC19.11■□□□□ 0.65
CDH12P55289 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH12P55289 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CDH12P55289 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH12P55289 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CDH12P55289 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CDH12P55289 AC112907.3-201ENST00000577781 2400 ntBASIC19.11■□□□□ 0.65
CDH12P55289 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH12P55289 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDH12P55289 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.11■□□□□ 0.65
CDH12P55289 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.1■□□□□ 0.65
CDH12P55289 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CDH12P55289 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH12P55289 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH12P55289 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH12P55289 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.1■□□□□ 0.65
CDH12P55289 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH12P55289 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.1■□□□□ 0.65
CDH12P55289 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.1■□□□□ 0.65
CDH12P55289 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH12P55289 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.1■□□□□ 0.65
CDH12P55289 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.1■□□□□ 0.65
CDH12P55289 AC005837.3-201ENST00000612163 286 ntBASIC19.1■□□□□ 0.65
CDH12P55289 AL358852.1-201ENST00000623174 1268 ntBASIC19.1■□□□□ 0.65
CDH12P55289 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.1■□□□□ 0.65
CDH12P55289 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH12P55289 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CDH12P55289 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.1■□□□□ 0.65
CDH12P55289 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH12P55289 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH12P55289 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH12P55289 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.1■□□□□ 0.65
CDH12P55289 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH12P55289 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.1■□□□□ 0.65
CDH12P55289 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH12P55289 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH12P55289 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CDH12P55289 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CDH12P55289 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH12P55289 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH12P55289 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH12P55289 AL512408.1-201ENST00000569378 2000 ntBASIC19.09■□□□□ 0.65
CDH12P55289 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH12P55289 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH12P55289 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.09■□□□□ 0.65
CDH12P55289 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH12P55289 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH12P55289 MIR6084-201ENST00000622012 110 ntBASIC19.09■□□□□ 0.65
CDH12P55289 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH12P55289 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms