Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 AC007225.1-201ENST00000566331 1836 ntBASIC26.28■■□□□ 1.8
BRPF1P55201 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRPF1P55201 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRPF1P55201 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRPF1P55201 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
BRPF1P55201 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
BRPF1P55201 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC26.28■■□□□ 1.8
BRPF1P55201 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.28■■□□□ 1.8
BRPF1P55201 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC26.28■■□□□ 1.8
BRPF1P55201 AC016405.3-201ENST00000607710 860 ntBASIC26.28■■□□□ 1.8
BRPF1P55201 GAMT-205ENST00000640762 751 ntTSL 5 BASIC26.28■■□□□ 1.8
BRPF1P55201 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRPF1P55201 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
BRPF1P55201 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
BRPF1P55201 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
BRPF1P55201 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC26.27■■□□□ 1.8
BRPF1P55201 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
BRPF1P55201 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
BRPF1P55201 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
BRPF1P55201 ARL16-209ENST00000573715 763 ntTSL 3 BASIC26.27■■□□□ 1.8
BRPF1P55201 ARL16-211ENST00000576135 694 ntTSL 3 BASIC26.27■■□□□ 1.8
BRPF1P55201 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC26.27■■□□□ 1.8
BRPF1P55201 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC26.27■■□□□ 1.8
BRPF1P55201 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
BRPF1P55201 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
BRPF1P55201 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC26.27■■□□□ 1.8
BRPF1P55201 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC26.27■■□□□ 1.8
BRPF1P55201 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
BRPF1P55201 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
BRPF1P55201 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
BRPF1P55201 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
BRPF1P55201 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC26.27■■□□□ 1.8
BRPF1P55201 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
BRPF1P55201 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
BRPF1P55201 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
BRPF1P55201 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
BRPF1P55201 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.26■■□□□ 1.79
BRPF1P55201 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.26■■□□□ 1.79
BRPF1P55201 MIR2861-201ENST00000636310 90 ntBASIC26.26■■□□□ 1.79
BRPF1P55201 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
BRPF1P55201 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
BRPF1P55201 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
BRPF1P55201 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
BRPF1P55201 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC26.25■■□□□ 1.79
BRPF1P55201 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
BRPF1P55201 PBX1-209ENST00000485769 834 ntTSL 2 BASIC26.25■■□□□ 1.79
BRPF1P55201 RARRES2P4-201ENST00000514074 484 ntBASIC26.25■■□□□ 1.79
BRPF1P55201 AC100791.3-201ENST00000617619 330 ntBASIC26.25■■□□□ 1.79
BRPF1P55201 BID-203ENST00000399765 1879 ntTSL 2 BASIC26.25■■□□□ 1.79
BRPF1P55201 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC26.25■■□□□ 1.79
BRPF1P55201 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
BRPF1P55201 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC26.25■■□□□ 1.79
BRPF1P55201 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
BRPF1P55201 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
BRPF1P55201 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
BRPF1P55201 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
BRPF1P55201 BMP1-204ENST00000397814 836 ntTSL 4 BASIC26.24■■□□□ 1.79
BRPF1P55201 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
BRPF1P55201 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC26.24■■□□□ 1.79
BRPF1P55201 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.24■■□□□ 1.79
BRPF1P55201 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
BRPF1P55201 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
BRPF1P55201 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
BRPF1P55201 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
BRPF1P55201 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC26.23■■□□□ 1.79
BRPF1P55201 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.23■■□□□ 1.79
BRPF1P55201 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
BRPF1P55201 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
BRPF1P55201 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC26.23■■□□□ 1.79
BRPF1P55201 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
BRPF1P55201 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BRPF1P55201 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BRPF1P55201 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
BRPF1P55201 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
BRPF1P55201 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC26.23■■□□□ 1.79
BRPF1P55201 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC26.23■■□□□ 1.79
BRPF1P55201 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC26.23■■□□□ 1.79
BRPF1P55201 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC26.23■■□□□ 1.79
BRPF1P55201 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC26.23■■□□□ 1.79
BRPF1P55201 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BRPF1P55201 ME2-216ENST00000639850 2331 ntTSL 5 BASIC26.23■■□□□ 1.79
BRPF1P55201 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BRPF1P55201 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
BRPF1P55201 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
BRPF1P55201 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC26.22■■□□□ 1.79
BRPF1P55201 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
BRPF1P55201 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
BRPF1P55201 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
BRPF1P55201 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
BRPF1P55201 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC26.22■■□□□ 1.79
BRPF1P55201 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
BRPF1P55201 AC007322.1-201ENST00000426983 750 ntBASIC26.22■■□□□ 1.79
BRPF1P55201 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC26.22■■□□□ 1.79
BRPF1P55201 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC26.22■■□□□ 1.79
BRPF1P55201 MAZ-216ENST00000616501 991 ntTSL 5 BASIC26.22■■□□□ 1.79
BRPF1P55201 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
BRPF1P55201 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.22■■□□□ 1.79
BRPF1P55201 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC26.22■■□□□ 1.79
BRPF1P55201 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC26.22■■□□□ 1.79
BRPF1P55201 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms