Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 UBP5YER144C 2418 nt4.08□□□□□ -1.76
UFD2P54860 FMP32YFL046W 624 nt4.08□□□□□ -1.76
UFD2P54860 ARG2YJL071W 1725 nt4.08□□□□□ -1.76
UFD2P54860 HEM4YOR278W 828 nt4.08□□□□□ -1.76
UFD2P54860 CIN1YOR349W 3045 nt4.08□□□□□ -1.76
UFD2P54860 URB2YJR041C 3525 nt4.08□□□□□ -1.76
UFD2P54860 ZDS1YMR273C 2748 nt4.08□□□□□ -1.76
UFD2P54860 FAA2YER015W 2235 nt4.07□□□□□ -1.76
UFD2P54860 HOS3YPL116W 2094 nt4.07□□□□□ -1.76
UFD2P54860 VHR2YER064C 1518 nt4.07□□□□□ -1.76
UFD2P54860 ATG21YPL100W 1491 nt4.07□□□□□ -1.76
UFD2P54860 KHA1YJL094C 2622 nt4.07□□□□□ -1.76
UFD2P54860 YDR183C-AYDR183C-A 258 nt4.07□□□□□ -1.76
UFD2P54860 TIF35YDR429C 825 nt4.07□□□□□ -1.76
UFD2P54860 PGA1YNL158W 597 nt4.07□□□□□ -1.76
UFD2P54860 ELM1YKL048C 1923 nt4.07□□□□□ -1.76
UFD2P54860 TAF7YMR227C 1773 nt4.07□□□□□ -1.76
UFD2P54860 YER107W-AYER107W-A 321 nt4.06□□□□□ -1.76
UFD2P54860 tM(CAU)Q1tM(CAU)Q1 76 nt4.06□□□□□ -1.76
UFD2P54860 BAT1YHR208W 1182 nt4.06□□□□□ -1.76
UFD2P54860 RFC3YNL290W 1023 nt4.06□□□□□ -1.76
UFD2P54860 SNF12YNR023W 1701 nt4.06□□□□□ -1.76
UFD2P54860 APE2YKL157W 2859 nt4.05□□□□□ -1.76
UFD2P54860 RMT2YDR465C 1239 nt4.05□□□□□ -1.76
UFD2P54860 FMP10YER182W 735 nt4.05□□□□□ -1.76
UFD2P54860 RPB9YGL070C 369 nt4.05□□□□□ -1.76
UFD2P54860 RSM19YNR037C 276 nt4.05□□□□□ -1.76
UFD2P54860 YOP1YPR028W 543 nt4.05□□□□□ -1.76
UFD2P54860 TCO89YPL180W 2400 nt4.05□□□□□ -1.76
UFD2P54860 ARK1YNL020C 1917 nt4.05□□□□□ -1.76
UFD2P54860 DNM1YLL001W 2274 nt4.05□□□□□ -1.76
UFD2P54860 YEL032C-AYEL032C-A 162 nt4.04□□□□□ -1.76
UFD2P54860 HMF1YER057C 390 nt4.04□□□□□ -1.76
UFD2P54860 YFR056CYFR056C 369 nt4.04□□□□□ -1.76
UFD2P54860 YGL074CYGL074C 327 nt4.04□□□□□ -1.76
UFD2P54860 PAU14YIL176C 363 nt4.04□□□□□ -1.76
UFD2P54860 PAU1YJL223C 363 nt4.04□□□□□ -1.76
UFD2P54860 EGD1YPL037C 474 nt4.04□□□□□ -1.76
UFD2P54860 ISU1YPL135W 498 nt4.04□□□□□ -1.76
UFD2P54860 YBR137WYBR137W 540 nt4.04□□□□□ -1.76
UFD2P54860 YBR141W-AYBR141W-A 96 nt4.04□□□□□ -1.76
UFD2P54860 21S_rRNA21S_rRNA 3296 nt4.04□□□□□ -1.76
UFD2P54860 LCB5YLR260W 2064 nt4.04□□□□□ -1.76
UFD2P54860 CWC22YGR278W 1734 nt4.04□□□□□ -1.76
UFD2P54860 KIP3YGL216W 2418 nt4.03□□□□□ -1.76
UFD2P54860 YGL063C-AYGL063C-A 150 nt4.03□□□□□ -1.76
UFD2P54860 YHR007C-AYHR007C-A 216 nt4.03□□□□□ -1.76
UFD2P54860 URM1YIL008W 300 nt4.03□□□□□ -1.76
UFD2P54860 ISF1YMR081C 1017 nt4.03□□□□□ -1.76
UFD2P54860 RAD4YER162C 2265 nt4.03□□□□□ -1.76
UFD2P54860 TRZ1YKR079C 2517 nt4.03□□□□□ -1.76
UFD2P54860 STN1YDR082W 1485 nt4.03□□□□□ -1.76
UFD2P54860 FLO10YKR102W 3510 nt4.03□□□□□ -1.76
UFD2P54860 ATP25YMR098C 1839 nt4.02□□□□□ -1.77
UFD2P54860 YBP1YBR216C 2025 nt4.02□□□□□ -1.77
UFD2P54860 TRS120YDR407C 3870 nt4.02□□□□□ -1.77
UFD2P54860 MCD4YKL165C 2760 nt4.02□□□□□ -1.77
UFD2P54860 TSA2YDR453C 591 nt4.02□□□□□ -1.77
UFD2P54860 UTP30YKR060W 825 nt4.02□□□□□ -1.77
UFD2P54860 EMC1YCL045C 2283 nt4.02□□□□□ -1.77
UFD2P54860 CCM1YGR150C 2595 nt4.02□□□□□ -1.77
UFD2P54860 TOP1YOL006C 2310 nt4.01□□□□□ -1.77
UFD2P54860 RAD2YGR258C 3096 nt4.01□□□□□ -1.77
UFD2P54860 ABP140YOR239W 1887 nt4.01□□□□□ -1.77
UFD2P54860 CCT7YJL111W 1653 nt4.01□□□□□ -1.77
UFD2P54860 YGR237CYGR237C 2358 nt4.01□□□□□ -1.77
UFD2P54860 YFL063WYFL063W 456 nt4.01□□□□□ -1.77
UFD2P54860 FCF2YLR051C 654 nt4.01□□□□□ -1.77
UFD2P54860 IRC23YOR044W 474 nt4.01□□□□□ -1.77
UFD2P54860 YPL152W-AYPL152W-A 99 nt4.01□□□□□ -1.77
UFD2P54860 SEG1YMR086W 2883 nt4□□□□□ -1.77
UFD2P54860 JIP5YPR169W 1479 nt4□□□□□ -1.77
UFD2P54860 NUP159YIL115C 4383 nt4□□□□□ -1.77
UFD2P54860 RPL22AYLR061W 366 nt4□□□□□ -1.77
UFD2P54860 RPS22BYLR367W 393 nt4□□□□□ -1.77
UFD2P54860 YBL073WYBL073W 312 nt4□□□□□ -1.77
UFD2P54860 NOT5YPR072W 1683 nt4□□□□□ -1.77
UFD2P54860 RSC1YGR056W 2787 nt3.99□□□□□ -1.77
UFD2P54860 HFM1YGL251C 3564 nt3.99□□□□□ -1.77
UFD2P54860 LSM8YJR022W 330 nt3.99□□□□□ -1.77
UFD2P54860 RPL9BYNL067W 576 nt3.99□□□□□ -1.77
UFD2P54860 RPS23BYPR132W 438 nt3.99□□□□□ -1.77
UFD2P54860 GYL1YMR192W 2163 nt3.99□□□□□ -1.77
UFD2P54860 RNR1YER070W 2667 nt3.98□□□□□ -1.77
UFD2P54860 SPT6YGR116W 4356 nt3.98□□□□□ -1.77
UFD2P54860 YJL015CYJL015C 285 nt3.98□□□□□ -1.77
UFD2P54860 YPL229WYPL229W 621 nt3.98□□□□□ -1.77
UFD2P54860 HPA3YEL066W 540 nt3.97□□□□□ -1.77
UFD2P54860 tT(UGU)Q1tT(UGU)Q1 76 nt3.97□□□□□ -1.77
UFD2P54860 TIM8YJR135W-A 264 nt3.97□□□□□ -1.77
UFD2P54860 YRM1YOR172W 2361 nt3.97□□□□□ -1.77
UFD2P54860 TAF6YGL112C 1551 nt3.97□□□□□ -1.77
UFD2P54860 YCG1YDR325W 3108 nt3.97□□□□□ -1.77
UFD2P54860 YGL140CYGL140C 3660 nt3.97□□□□□ -1.77
UFD2P54860 OSH6YKR003W 1347 nt3.96□□□□□ -1.77
UFD2P54860 YGL007C-AYGL007C-A 87 nt3.96□□□□□ -1.78
UFD2P54860 ERB1YMR049C 2424 nt3.96□□□□□ -1.78
UFD2P54860 YHR078WYHR078W 1659 nt3.96□□□□□ -1.78
UFD2P54860 SPP382YLR424W 2127 nt3.95□□□□□ -1.78
UFD2P54860 YKL033W-AYKL033W-A 711 nt3.95□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms