Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PDE1AP54750 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PDE1AP54750 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
PDE1AP54750 AC007322.3-201ENST00000426526 701 ntBASIC25.18■■□□□ 1.62
PDE1AP54750 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.18■■□□□ 1.62
PDE1AP54750 AC022517.1-201ENST00000592429 346 ntBASIC25.18■■□□□ 1.62
PDE1AP54750 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
PDE1AP54750 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.18■■□□□ 1.62
PDE1AP54750 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PDE1AP54750 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
PDE1AP54750 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PDE1AP54750 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC25.18■■□□□ 1.62
PDE1AP54750 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.18■■□□□ 1.62
PDE1AP54750 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC25.17■■□□□ 1.62
PDE1AP54750 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC25.17■■□□□ 1.62
PDE1AP54750 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PDE1AP54750 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDE1AP54750 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDE1AP54750 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PDE1AP54750 AC016769.1-201ENST00000409132 1010 ntBASIC25.17■■□□□ 1.62
PDE1AP54750 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PDE1AP54750 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.17■■□□□ 1.62
PDE1AP54750 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.17■■□□□ 1.62
PDE1AP54750 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.17■■□□□ 1.62
PDE1AP54750 AC011767.1-201ENST00000617410 1153 ntBASIC25.17■■□□□ 1.62
PDE1AP54750 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
PDE1AP54750 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
PDE1AP54750 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
PDE1AP54750 GABARAPL3-202ENST00000624044 1851 ntBASIC25.17■■□□□ 1.62
PDE1AP54750 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDE1AP54750 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC25.16■■□□□ 1.62
PDE1AP54750 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDE1AP54750 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PDE1AP54750 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PDE1AP54750 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
PDE1AP54750 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDE1AP54750 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDE1AP54750 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.16■■□□□ 1.62
PDE1AP54750 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.16■■□□□ 1.62
PDE1AP54750 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.16■■□□□ 1.62
PDE1AP54750 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PDE1AP54750 DUX4L16-201ENST00000555130 1264 ntBASIC25.16■■□□□ 1.62
PDE1AP54750 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.16■■□□□ 1.62
PDE1AP54750 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC25.16■■□□□ 1.62
PDE1AP54750 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC25.16■■□□□ 1.62
PDE1AP54750 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PDE1AP54750 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PDE1AP54750 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDE1AP54750 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDE1AP54750 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDE1AP54750 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PDE1AP54750 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PDE1AP54750 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PDE1AP54750 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDE1AP54750 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
PDE1AP54750 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC25.15■■□□□ 1.62
PDE1AP54750 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDE1AP54750 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDE1AP54750 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDE1AP54750 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDE1AP54750 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.15■■□□□ 1.62
PDE1AP54750 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PDE1AP54750 CNN2P6-201ENST00000439038 900 ntBASIC25.15■■□□□ 1.62
PDE1AP54750 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.15■■□□□ 1.62
PDE1AP54750 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.15■■□□□ 1.62
PDE1AP54750 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.15■■□□□ 1.62
PDE1AP54750 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.15■■□□□ 1.62
PDE1AP54750 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDE1AP54750 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDE1AP54750 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PDE1AP54750 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
PDE1AP54750 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC25.15■■□□□ 1.62
PDE1AP54750 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDE1AP54750 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC25.15■■□□□ 1.62
PDE1AP54750 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.14■■□□□ 1.62
PDE1AP54750 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
PDE1AP54750 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
PDE1AP54750 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PDE1AP54750 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.14■■□□□ 1.62
PDE1AP54750 AC007322.4-201ENST00000509611 723 ntBASIC25.14■■□□□ 1.62
PDE1AP54750 MIR2861-201ENST00000636310 90 ntBASIC25.14■■□□□ 1.62
PDE1AP54750 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
PDE1AP54750 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PDE1AP54750 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
PDE1AP54750 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
PDE1AP54750 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PDE1AP54750 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PDE1AP54750 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
PDE1AP54750 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PDE1AP54750 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PDE1AP54750 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.13■■□□□ 1.61
PDE1AP54750 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PDE1AP54750 AC092437.1-201ENST00000624794 1048 ntBASIC25.13■■□□□ 1.61
PDE1AP54750 AC013268.1-206ENST00000638368 961 ntBASIC25.13■■□□□ 1.61
PDE1AP54750 AC112229.1-201ENST00000639295 961 ntBASIC25.13■■□□□ 1.61
PDE1AP54750 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PDE1AP54750 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PDE1AP54750 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC25.13■■□□□ 1.61
PDE1AP54750 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25.12■■□□□ 1.61
PDE1AP54750 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms