Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN3P54252 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ATXN3P54252 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN3P54252 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN3P54252 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ATXN3P54252 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN3P54252 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN3P54252 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATXN3P54252 LINC01960-201ENST00000563759 1884 ntBASIC20.92■□□□□ 0.94
ATXN3P54252 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN3P54252 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN3P54252 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATXN3P54252 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.91■□□□□ 0.94
ATXN3P54252 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
ATXN3P54252 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.91■□□□□ 0.94
ATXN3P54252 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.91■□□□□ 0.94
ATXN3P54252 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.91■□□□□ 0.94
ATXN3P54252 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.91■□□□□ 0.94
ATXN3P54252 EEF1DP3-203ENST00000566025 782 ntBASIC20.91■□□□□ 0.94
ATXN3P54252 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ATXN3P54252 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.91■□□□□ 0.94
ATXN3P54252 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3P54252 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3P54252 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ATXN3P54252 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
ATXN3P54252 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3P54252 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
ATXN3P54252 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.9■□□□□ 0.94
ATXN3P54252 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.9■□□□□ 0.94
ATXN3P54252 RPS2P4-201ENST00000476944 856 ntBASIC20.9■□□□□ 0.94
ATXN3P54252 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3P54252 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.9■□□□□ 0.94
ATXN3P54252 AC083880.1-201ENST00000608266 535 ntBASIC20.9■□□□□ 0.94
ATXN3P54252 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3P54252 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3P54252 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3P54252 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3P54252 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3P54252 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3P54252 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATXN3P54252 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
ATXN3P54252 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ATXN3P54252 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATXN3P54252 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.89■□□□□ 0.94
ATXN3P54252 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ATXN3P54252 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATXN3P54252 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.89■□□□□ 0.94
ATXN3P54252 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.89■□□□□ 0.93
ATXN3P54252 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3P54252 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3P54252 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3P54252 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.89■□□□□ 0.93
ATXN3P54252 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ATXN3P54252 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3P54252 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
ATXN3P54252 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3P54252 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3P54252 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3P54252 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ATXN3P54252 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3P54252 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATXN3P54252 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN3P54252 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ATXN3P54252 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ATXN3P54252 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN3P54252 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN3P54252 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.88■□□□□ 0.93
ATXN3P54252 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ATXN3P54252 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.88■□□□□ 0.93
ATXN3P54252 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.88■□□□□ 0.93
ATXN3P54252 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.88■□□□□ 0.93
ATXN3P54252 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.88■□□□□ 0.93
ATXN3P54252 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.88■□□□□ 0.93
ATXN3P54252 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN3P54252 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN3P54252 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATXN3P54252 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.87■□□□□ 0.93
ATXN3P54252 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN3P54252 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.87■□□□□ 0.93
ATXN3P54252 AC128676.1-201ENST00000454392 318 ntBASIC20.87■□□□□ 0.93
ATXN3P54252 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.87■□□□□ 0.93
ATXN3P54252 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN3P54252 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATXN3P54252 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN3P54252 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.86■□□□□ 0.93
ATXN3P54252 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN3P54252 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ATXN3P54252 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.86■□□□□ 0.93
ATXN3P54252 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ATXN3P54252 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN3P54252 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN3P54252 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN3P54252 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN3P54252 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.86■□□□□ 0.93
ATXN3P54252 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.86■□□□□ 0.93
ATXN3P54252 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.86■□□□□ 0.93
ATXN3P54252 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
ATXN3P54252 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATXN3P54252 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.86■□□□□ 0.93
ATXN3P54252 AC091874.3-201ENST00000512672 1195 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms