Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 GIM5YML094W 492 nt2.16□□□□□ -2.06
YNL040WP53960 POP7YBR167C 423 nt2.16□□□□□ -2.06
YNL040WP53960 SEC66YBR171W 621 nt2.16□□□□□ -2.06
YNL040WP53960 LST4YKL176C 2487 nt2.16□□□□□ -2.06
YNL040WP53960 ATG11YPR049C 3537 nt2.16□□□□□ -2.06
YNL040WP53960 KOG1YHR186C 4674 nt2.15□□□□□ -2.06
YNL040WP53960 PUF4YGL014W 2667 nt2.15□□□□□ -2.06
YNL040WP53960 RSM28YDR494W 1086 nt2.15□□□□□ -2.07
YNL040WP53960 PCL5YHR071W 690 nt2.15□□□□□ -2.07
YNL040WP53960 YHR180W-AYHR180W-A 183 nt2.15□□□□□ -2.07
YNL040WP53960 RPS29AYLR388W 171 nt2.15□□□□□ -2.07
YNL040WP53960 URA5YML106W 681 nt2.15□□□□□ -2.07
YNL040WP53960 YPR014CYPR014C 330 nt2.15□□□□□ -2.07
YNL040WP53960 NPR1YNL183C 2373 nt2.15□□□□□ -2.07
YNL040WP53960 BFR1YOR198C 1413 nt2.15□□□□□ -2.07
YNL040WP53960 MES1YGR264C 2256 nt2.15□□□□□ -2.07
YNL040WP53960 TRS130YMR218C 3309 nt2.14□□□□□ -2.07
YNL040WP53960 SSP1YHR184W 1716 nt2.14□□□□□ -2.07
YNL040WP53960 NEO1YIL048W 3456 nt2.14□□□□□ -2.07
YNL040WP53960 GPM2YDL021W 936 nt2.14□□□□□ -2.07
YNL040WP53960 YER091C-AYER091C-A 222 nt2.14□□□□□ -2.07
YNL040WP53960 YJL133C-AYJL133C-A 225 nt2.14□□□□□ -2.07
YNL040WP53960 YPL119C-AYPL119C-A 264 nt2.14□□□□□ -2.07
YNL040WP53960 YBR063CYBR063C 1215 nt2.14□□□□□ -2.07
YNL040WP53960 MSS18YPR134W 807 nt2.14□□□□□ -2.07
YNL040WP53960 SUS1YBR111W-A 291 nt2.14□□□□□ -2.07
YNL040WP53960 BNI1YNL271C 5862 nt2.14□□□□□ -2.07
YNL040WP53960 MIC19YFR011C 513 nt2.13□□□□□ -2.07
YNL040WP53960 PGD1YGL025C 1194 nt2.13□□□□□ -2.07
YNL040WP53960 YGL109WYGL109W 324 nt2.13□□□□□ -2.07
YNL040WP53960 PAI3YMR174C 207 nt2.13□□□□□ -2.07
YNL040WP53960 YNR034W-AYNR034W-A 297 nt2.13□□□□□ -2.07
YNL040WP53960 HOS4YIL112W 3252 nt2.13□□□□□ -2.07
YNL040WP53960 SDC25YLL016W 3147 nt2.12□□□□□ -2.07
YNL040WP53960 YDR248CYDR248C 582 nt2.12□□□□□ -2.07
YNL040WP53960 NTF2YER009W 378 nt2.12□□□□□ -2.07
YNL040WP53960 YHR050W-AYHR050W-A 171 nt2.12□□□□□ -2.07
YNL040WP53960 EST3YIL009C-A 546 nt2.12□□□□□ -2.07
YNL040WP53960 ECI1YLR284C 843 nt2.12□□□□□ -2.07
YNL040WP53960 YBR051WYBR051W 351 nt2.12□□□□□ -2.07
YNL040WP53960 ADF1YCL058W-A 342 nt2.12□□□□□ -2.07
YNL040WP53960 YNL018CYNL018C 1839 nt2.12□□□□□ -2.07
YNL040WP53960 PCK1YKR097W 1650 nt2.12□□□□□ -2.07
YNL040WP53960 YCR013CYCR013C 648 nt2.11□□□□□ -2.07
YNL040WP53960 YCR090CYCR090C 549 nt2.11□□□□□ -2.07
YNL040WP53960 EMP24YGL200C 612 nt2.11□□□□□ -2.07
YNL040WP53960 RMP1YLR145W 606 nt2.11□□□□□ -2.07
YNL040WP53960 YBR062CYBR062C 543 nt2.11□□□□□ -2.07
YNL040WP53960 CBP6YBR120C 489 nt2.11□□□□□ -2.07
YNL040WP53960 HSC82YMR186W 2118 nt2.11□□□□□ -2.07
YNL040WP53960 STH1YIL126W 4080 nt2.11□□□□□ -2.07
YNL040WP53960 PUT3YKL015W 2940 nt2.1□□□□□ -2.07
YNL040WP53960 KRE33YNL132W 3171 nt2.1□□□□□ -2.07
YNL040WP53960 YGR050CYGR050C 357 nt2.1□□□□□ -2.07
YNL040WP53960 YIP1YGR172C 747 nt2.1□□□□□ -2.07
YNL040WP53960 YJL147CYJL147C 1149 nt2.1□□□□□ -2.07
YNL040WP53960 YET1YKL065C 621 nt2.1□□□□□ -2.07
YNL040WP53960 RNP1YLL046C 750 nt2.1□□□□□ -2.07
YNL040WP53960 SIP18YMR175W 240 nt2.1□□□□□ -2.07
YNL040WP53960 YCL002CYCL002C 792 nt2.1□□□□□ -2.07
YNL040WP53960 YCT1YLL055W 1596 nt2.1□□□□□ -2.07
YNL040WP53960 SSY1YDR160W 2559 nt2.09□□□□□ -2.07
YNL040WP53960 YEA4YEL004W 1029 nt2.09□□□□□ -2.07
YNL040WP53960 TAD1YGL243W 1203 nt2.09□□□□□ -2.07
YNL040WP53960 AIM19YIL087C 474 nt2.09□□□□□ -2.07
YNL040WP53960 YJL202CYJL202C 348 nt2.09□□□□□ -2.07
YNL040WP53960 RCN1YKL159C 636 nt2.09□□□□□ -2.07
YNL040WP53960 NBP1YLR457C 960 nt2.09□□□□□ -2.07
YNL040WP53960 RPS16AYMR143W 432 nt2.09□□□□□ -2.07
YNL040WP53960 RGM1YMR182C 636 nt2.09□□□□□ -2.07
YNL040WP53960 RPL25YOL127W 429 nt2.09□□□□□ -2.07
YNL040WP53960 GPI17YDR434W 1605 nt2.09□□□□□ -2.08
YNL040WP53960 ESC2YDR363W 1371 nt2.09□□□□□ -2.08
YNL040WP53960 TOR2YKL203C 7425 nt2.09□□□□□ -2.08
YNL040WP53960 YIL080WYIL080W 4722 nt2.08□□□□□ -2.08
YNL040WP53960 RGA1YOR127W 3024 nt2.08□□□□□ -2.08
YNL040WP53960 YCR099CYCR099C 468 nt2.08□□□□□ -2.08
YNL040WP53960 MRP10YDL045W-A 288 nt2.08□□□□□ -2.08
YNL040WP53960 YDL118WYDL118W 381 nt2.08□□□□□ -2.08
YNL040WP53960 ADK1YDR226W 669 nt2.08□□□□□ -2.08
YNL040WP53960 YDR537CYDR537C 606 nt2.08□□□□□ -2.08
YNL040WP53960 CKA1YIL035C 1119 nt2.08□□□□□ -2.08
YNL040WP53960 YAL042C-AYAL042C-A 378 nt2.08□□□□□ -2.08
YNL040WP53960 PEP12YOR036W 867 nt2.08□□□□□ -2.08
YNL040WP53960 YIL166CYIL166C 1629 nt2.08□□□□□ -2.08
YNL040WP53960 ROY1YMR258C 1662 nt2.08□□□□□ -2.08
YNL040WP53960 NPR3YHL023C 3441 nt2.08□□□□□ -2.08
YNL040WP53960 UBX3YDL091C 1368 nt2.08□□□□□ -2.08
YNL040WP53960 MFB1YDR219C 1398 nt2.08□□□□□ -2.08
YNL040WP53960 RAV1YJR033C 4074 nt2.07□□□□□ -2.08
YNL040WP53960 SHS1YDL225W 1656 nt2.07□□□□□ -2.08
YNL040WP53960 TRZ1YKR079C 2517 nt2.07□□□□□ -2.08
YNL040WP53960 RSM18YER050C 417 nt2.07□□□□□ -2.08
YNL040WP53960 MPO1YGL010W 525 nt2.07□□□□□ -2.08
YNL040WP53960 YIR020C-BYIR020C-B 735 nt2.07□□□□□ -2.08
YNL040WP53960 YAL016C-BYAL016C-B 186 nt2.07□□□□□ -2.08
YNL040WP53960 VPH2YKL119C 648 nt2.07□□□□□ -2.08
YNL040WP53960 GYP5YPL249C 2685 nt2.07□□□□□ -2.08
YNL040WP53960 USO1YDL058W 5373 nt2.07□□□□□ -2.08
YNL040WP53960 PBP4YDL053C 558 nt2.06□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 19.2 ms