Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CLCN3P51790 KRT18P29-201ENST00000397031 1267 ntBASIC22.69■■□□□ 1.22
CLCN3P51790 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.69■■□□□ 1.22
CLCN3P51790 AC008687.6-201ENST00000596318 630 ntBASIC22.69■■□□□ 1.22
CLCN3P51790 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CLCN3P51790 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CLCN3P51790 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.69■■□□□ 1.22
CLCN3P51790 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CLCN3P51790 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CLCN3P51790 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CLCN3P51790 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.68■■□□□ 1.22
CLCN3P51790 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CLCN3P51790 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.68■■□□□ 1.22
CLCN3P51790 PRORSD1P-201ENST00000295112 541 ntBASIC22.68■■□□□ 1.22
CLCN3P51790 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLCN3P51790 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLCN3P51790 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLCN3P51790 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.68■■□□□ 1.22
CLCN3P51790 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.68■■□□□ 1.22
CLCN3P51790 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.68■■□□□ 1.22
CLCN3P51790 UNC93B5-201ENST00000530315 699 ntBASIC22.68■■□□□ 1.22
CLCN3P51790 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.68■■□□□ 1.22
CLCN3P51790 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.68■■□□□ 1.22
CLCN3P51790 AL024507.2-201ENST00000606070 2574 ntBASIC22.68■■□□□ 1.22
CLCN3P51790 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CLCN3P51790 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.68■■□□□ 1.22
CLCN3P51790 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN3P51790 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN3P51790 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CLCN3P51790 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CLCN3P51790 AC087633.2-202ENST00000565166 1439 ntBASIC22.67■■□□□ 1.22
CLCN3P51790 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CLCN3P51790 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.67■■□□□ 1.22
CLCN3P51790 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.67■■□□□ 1.22
CLCN3P51790 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN3P51790 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN3P51790 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CLCN3P51790 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CLCN3P51790 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN3P51790 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN3P51790 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN3P51790 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN3P51790 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN3P51790 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN3P51790 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CLCN3P51790 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CLCN3P51790 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN3P51790 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN3P51790 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN3P51790 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.66■■□□□ 1.22
CLCN3P51790 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN3P51790 AC060766.5-201ENST00000590539 871 ntBASIC22.66■■□□□ 1.22
CLCN3P51790 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.66■■□□□ 1.22
CLCN3P51790 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.66■■□□□ 1.22
CLCN3P51790 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN3P51790 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN3P51790 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.66■■□□□ 1.22
CLCN3P51790 HLA-B-256ENST00000639848 1089 ntBASIC22.66■■□□□ 1.22
CLCN3P51790 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN3P51790 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN3P51790 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN3P51790 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CLCN3P51790 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CLCN3P51790 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.66■■□□□ 1.22
CLCN3P51790 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
CLCN3P51790 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.66■■□□□ 1.22
CLCN3P51790 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN3P51790 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
CLCN3P51790 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN3P51790 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CLCN3P51790 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.65■■□□□ 1.22
CLCN3P51790 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN3P51790 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CLCN3P51790 AC006058.3-201ENST00000606217 1069 ntBASIC22.65■■□□□ 1.22
CLCN3P51790 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN3P51790 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.65■■□□□ 1.22
CLCN3P51790 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN3P51790 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.65■■□□□ 1.22
CLCN3P51790 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CLCN3P51790 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.65■■□□□ 1.22
CLCN3P51790 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN3P51790 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.65■■□□□ 1.22
CLCN3P51790 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLCN3P51790 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CLCN3P51790 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
CLCN3P51790 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLCN3P51790 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
CLCN3P51790 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLCN3P51790 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.64■■□□□ 1.21
CLCN3P51790 AP003097.1-201ENST00000530657 1135 ntBASIC22.64■■□□□ 1.21
CLCN3P51790 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.64■■□□□ 1.21
CLCN3P51790 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CLCN3P51790 AC066615.1-201ENST00000640911 628 ntBASIC22.64■■□□□ 1.21
CLCN3P51790 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CLCN3P51790 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLCN3P51790 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CLCN3P51790 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN3P51790 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLCN3P51790 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
CLCN3P51790 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms