Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.03■□□□□ 0.48
CX3CR1P49238 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CX3CR1P49238 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
CX3CR1P49238 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CX3CR1P49238 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CX3CR1P49238 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.03■□□□□ 0.48
CX3CR1P49238 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CX3CR1P49238 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.03■□□□□ 0.48
CX3CR1P49238 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CX3CR1P49238 CCDC92B-201ENST00000575506 885 ntBASIC18.03■□□□□ 0.48
CX3CR1P49238 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.03■□□□□ 0.48
CX3CR1P49238 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CX3CR1P49238 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.03■□□□□ 0.48
CX3CR1P49238 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CX3CR1P49238 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.03■□□□□ 0.48
CX3CR1P49238 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CX3CR1P49238 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CX3CR1P49238 FP700111.2-201ENST00000619190 1892 ntBASIC18.03■□□□□ 0.48
CX3CR1P49238 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CX3CR1P49238 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CX3CR1P49238 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CX3CR1P49238 AP005212.1-201ENST00000581547 1997 ntBASIC18.02■□□□□ 0.48
CX3CR1P49238 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CX3CR1P49238 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CX3CR1P49238 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CX3CR1P49238 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CX3CR1P49238 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CX3CR1P49238 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CX3CR1P49238 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.02■□□□□ 0.48
CX3CR1P49238 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CX3CR1P49238 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CX3CR1P49238 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CX3CR1P49238 ZNRF2P3-201ENST00000424200 374 ntBASIC18.02■□□□□ 0.48
CX3CR1P49238 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.02■□□□□ 0.48
CX3CR1P49238 KRT18P14-201ENST00000534205 1250 ntBASIC18.02■□□□□ 0.48
CX3CR1P49238 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.02■□□□□ 0.48
CX3CR1P49238 AP001160.3-201ENST00000601484 763 ntBASIC18.02■□□□□ 0.48
CX3CR1P49238 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.02■□□□□ 0.48
CX3CR1P49238 GABARAPL3-202ENST00000624044 1851 ntBASIC18.02■□□□□ 0.48
CX3CR1P49238 RARRES2P11-201ENST00000635158 484 ntBASIC18.02■□□□□ 0.48
CX3CR1P49238 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.02■□□□□ 0.48
CX3CR1P49238 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.02■□□□□ 0.48
CX3CR1P49238 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CX3CR1P49238 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.01■□□□□ 0.47
CX3CR1P49238 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CX3CR1P49238 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.01■□□□□ 0.47
CX3CR1P49238 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.01■□□□□ 0.47
CX3CR1P49238 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.01■□□□□ 0.47
CX3CR1P49238 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.01■□□□□ 0.47
CX3CR1P49238 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.01■□□□□ 0.47
CX3CR1P49238 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CX3CR1P49238 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CX3CR1P49238 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.01■□□□□ 0.47
CX3CR1P49238 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CX3CR1P49238 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CX3CR1P49238 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.01■□□□□ 0.47
CX3CR1P49238 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CX3CR1P49238 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CX3CR1P49238 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CX3CR1P49238 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CX3CR1P49238 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CX3CR1P49238 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CX3CR1P49238 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CX3CR1P49238 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18■□□□□ 0.47
CX3CR1P49238 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CX3CR1P49238 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18■□□□□ 0.47
CX3CR1P49238 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18■□□□□ 0.47
CX3CR1P49238 SLC7A5P2-201ENST00000553010 536 ntBASIC18■□□□□ 0.47
CX3CR1P49238 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18■□□□□ 0.47
CX3CR1P49238 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18■□□□□ 0.47
CX3CR1P49238 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18■□□□□ 0.47
CX3CR1P49238 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CX3CR1P49238 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18■□□□□ 0.47
CX3CR1P49238 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CX3CR1P49238 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18■□□□□ 0.47
CX3CR1P49238 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18■□□□□ 0.47
CX3CR1P49238 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CX3CR1P49238 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CX3CR1P49238 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CX3CR1P49238 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CX3CR1P49238 AC027702.1-201ENST00000563810 1770 ntBASIC17.99■□□□□ 0.47
CX3CR1P49238 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.99■□□□□ 0.47
CX3CR1P49238 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CX3CR1P49238 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms