Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARCN1P48444 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARCN1P48444 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ARCN1P48444 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARCN1P48444 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.61■□□□□ 0.89
ARCN1P48444 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
ARCN1P48444 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARCN1P48444 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARCN1P48444 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.61■□□□□ 0.89
ARCN1P48444 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.61■□□□□ 0.89
ARCN1P48444 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.61■□□□□ 0.89
ARCN1P48444 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARCN1P48444 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.61■□□□□ 0.89
ARCN1P48444 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.61■□□□□ 0.89
ARCN1P48444 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARCN1P48444 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.61■□□□□ 0.89
ARCN1P48444 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.61■□□□□ 0.89
ARCN1P48444 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARCN1P48444 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.6■□□□□ 0.89
ARCN1P48444 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.6■□□□□ 0.89
ARCN1P48444 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARCN1P48444 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.6■□□□□ 0.89
ARCN1P48444 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.6■□□□□ 0.89
ARCN1P48444 KRT19P1-201ENST00000405746 1186 ntBASIC20.6■□□□□ 0.89
ARCN1P48444 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.6■□□□□ 0.89
ARCN1P48444 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.6■□□□□ 0.89
ARCN1P48444 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARCN1P48444 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.6■□□□□ 0.89
ARCN1P48444 AC243732.1-201ENST00000612648 864 ntBASIC20.6■□□□□ 0.89
ARCN1P48444 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.6■□□□□ 0.89
ARCN1P48444 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.6■□□□□ 0.89
ARCN1P48444 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARCN1P48444 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARCN1P48444 RBM17P2-201ENST00000616397 1405 ntBASIC20.6■□□□□ 0.89
ARCN1P48444 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARCN1P48444 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.6■□□□□ 0.89
ARCN1P48444 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.6■□□□□ 0.89
ARCN1P48444 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.6■□□□□ 0.89
ARCN1P48444 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.6■□□□□ 0.89
ARCN1P48444 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARCN1P48444 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARCN1P48444 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARCN1P48444 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARCN1P48444 AC020907.5-201ENST00000624372 1936 ntBASIC20.59■□□□□ 0.89
ARCN1P48444 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARCN1P48444 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.59■□□□□ 0.89
ARCN1P48444 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ARCN1P48444 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.59■□□□□ 0.89
ARCN1P48444 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ARCN1P48444 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARCN1P48444 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.59■□□□□ 0.89
ARCN1P48444 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARCN1P48444 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARCN1P48444 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.59■□□□□ 0.89
ARCN1P48444 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.59■□□□□ 0.89
ARCN1P48444 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ARCN1P48444 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ARCN1P48444 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
ARCN1P48444 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.59■□□□□ 0.89
ARCN1P48444 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARCN1P48444 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.59■□□□□ 0.89
ARCN1P48444 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ARCN1P48444 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ARCN1P48444 AL121603.2-201ENST00000557373 2117 ntBASIC20.59■□□□□ 0.89
ARCN1P48444 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARCN1P48444 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARCN1P48444 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARCN1P48444 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARCN1P48444 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARCN1P48444 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARCN1P48444 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ARCN1P48444 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARCN1P48444 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARCN1P48444 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARCN1P48444 AC091799.1-201ENST00000422823 811 ntBASIC20.58■□□□□ 0.89
ARCN1P48444 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.58■□□□□ 0.89
ARCN1P48444 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.58■□□□□ 0.89
ARCN1P48444 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.58■□□□□ 0.89
ARCN1P48444 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.58■□□□□ 0.89
ARCN1P48444 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.58■□□□□ 0.89
ARCN1P48444 AC116050.2-201ENST00000612102 1779 ntBASIC20.58■□□□□ 0.89
ARCN1P48444 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARCN1P48444 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ARCN1P48444 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
ARCN1P48444 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
ARCN1P48444 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ARCN1P48444 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARCN1P48444 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARCN1P48444 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARCN1P48444 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARCN1P48444 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
ARCN1P48444 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ARCN1P48444 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARCN1P48444 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.57■□□□□ 0.88
ARCN1P48444 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.57■□□□□ 0.88
ARCN1P48444 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.57■□□□□ 0.88
ARCN1P48444 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARCN1P48444 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARCN1P48444 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARCN1P48444 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms