Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 KRT8P9-201ENST00000558927 1449 ntBASIC23.79■■□□□ 1.4
TM4SF4P48230 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TM4SF4P48230 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC23.79■■□□□ 1.4
TM4SF4P48230 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TM4SF4P48230 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.79■■□□□ 1.4
TM4SF4P48230 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
TM4SF4P48230 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.79■■□□□ 1.4
TM4SF4P48230 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TM4SF4P48230 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.79■■□□□ 1.4
TM4SF4P48230 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.79■■□□□ 1.4
TM4SF4P48230 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.78■■□□□ 1.4
TM4SF4P48230 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TM4SF4P48230 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TM4SF4P48230 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TM4SF4P48230 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TM4SF4P48230 AL353807.1-201ENST00000427475 662 ntBASIC23.78■■□□□ 1.4
TM4SF4P48230 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.78■■□□□ 1.4
TM4SF4P48230 RBM17P1-201ENST00000453646 1190 ntBASIC23.78■■□□□ 1.4
TM4SF4P48230 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TM4SF4P48230 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC23.78■■□□□ 1.4
TM4SF4P48230 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.78■■□□□ 1.4
TM4SF4P48230 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TM4SF4P48230 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TM4SF4P48230 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
TM4SF4P48230 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.78■■□□□ 1.4
TM4SF4P48230 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF4P48230 AC092053.2-201ENST00000640557 1818 ntBASIC23.77■■□□□ 1.4
TM4SF4P48230 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF4P48230 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF4P48230 AC079598.2-202ENST00000546624 1451 ntBASIC23.77■■□□□ 1.4
TM4SF4P48230 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.77■■□□□ 1.4
TM4SF4P48230 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF4P48230 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC23.77■■□□□ 1.4
TM4SF4P48230 FAM197Y1-201ENST00000421178 764 ntBASIC23.77■■□□□ 1.4
TM4SF4P48230 KRT16P5-201ENST00000455284 522 ntBASIC23.77■■□□□ 1.4
TM4SF4P48230 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC23.77■■□□□ 1.4
TM4SF4P48230 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.77■■□□□ 1.4
TM4SF4P48230 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.77■■□□□ 1.4
TM4SF4P48230 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC23.77■■□□□ 1.4
TM4SF4P48230 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.77■■□□□ 1.4
TM4SF4P48230 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF4P48230 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF4P48230 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF4P48230 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF4P48230 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF4P48230 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF4P48230 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF4P48230 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF4P48230 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.77■■□□□ 1.4
TM4SF4P48230 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF4P48230 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.77■■□□□ 1.4
TM4SF4P48230 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TM4SF4P48230 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.76■■□□□ 1.39
TM4SF4P48230 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.76■■□□□ 1.39
TM4SF4P48230 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.76■■□□□ 1.39
TM4SF4P48230 AC073508.3-201ENST00000619697 1419 ntBASIC23.76■■□□□ 1.39
TM4SF4P48230 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TM4SF4P48230 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
TM4SF4P48230 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TM4SF4P48230 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TM4SF4P48230 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
TM4SF4P48230 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TM4SF4P48230 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC23.76■■□□□ 1.39
TM4SF4P48230 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.76■■□□□ 1.39
TM4SF4P48230 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.76■■□□□ 1.39
TM4SF4P48230 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TM4SF4P48230 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TM4SF4P48230 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TM4SF4P48230 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
TM4SF4P48230 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TM4SF4P48230 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.76■■□□□ 1.39
TM4SF4P48230 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TM4SF4P48230 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
TM4SF4P48230 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TM4SF4P48230 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TM4SF4P48230 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TM4SF4P48230 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
TM4SF4P48230 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TM4SF4P48230 DUT-205ENST00000558813 769 ntTSL 2 BASIC23.75■■□□□ 1.39
TM4SF4P48230 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.75■■□□□ 1.39
TM4SF4P48230 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.75■■□□□ 1.39
TM4SF4P48230 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.75■■□□□ 1.39
TM4SF4P48230 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
TM4SF4P48230 LINC01568-207ENST00000641790 1380 ntBASIC23.75■■□□□ 1.39
TM4SF4P48230 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TM4SF4P48230 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TM4SF4P48230 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TM4SF4P48230 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TM4SF4P48230 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.74■■□□□ 1.39
TM4SF4P48230 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
TM4SF4P48230 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
TM4SF4P48230 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.74■■□□□ 1.39
TM4SF4P48230 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC23.74■■□□□ 1.39
TM4SF4P48230 KRT18P57-201ENST00000443599 1254 ntBASIC23.74■■□□□ 1.39
TM4SF4P48230 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TM4SF4P48230 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC23.74■■□□□ 1.39
TM4SF4P48230 AC073195.1-201ENST00000607241 877 ntBASIC23.74■■□□□ 1.39
TM4SF4P48230 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TM4SF4P48230 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TM4SF4P48230 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms