Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CXCL12P48061 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL12P48061 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.65■□□□□ 0.9
CXCL12P48061 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL12P48061 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL12P48061 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL12P48061 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL12P48061 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.65■□□□□ 0.9
CXCL12P48061 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL12P48061 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL12P48061 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CXCL12P48061 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL12P48061 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
CXCL12P48061 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.65■□□□□ 0.9
CXCL12P48061 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL12P48061 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.65■□□□□ 0.9
CXCL12P48061 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.65■□□□□ 0.9
CXCL12P48061 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CXCL12P48061 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CXCL12P48061 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.65■□□□□ 0.9
CXCL12P48061 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL12P48061 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL12P48061 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CXCL12P48061 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.64■□□□□ 0.9
CXCL12P48061 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.64■□□□□ 0.9
CXCL12P48061 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.64■□□□□ 0.89
CXCL12P48061 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CXCL12P48061 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CXCL12P48061 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.64■□□□□ 0.89
CXCL12P48061 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CXCL12P48061 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CXCL12P48061 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CXCL12P48061 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CXCL12P48061 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.64■□□□□ 0.89
CXCL12P48061 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CXCL12P48061 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CXCL12P48061 PGM5P4-201ENST00000421970 445 ntBASIC20.64■□□□□ 0.89
CXCL12P48061 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.64■□□□□ 0.89
CXCL12P48061 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.64■□□□□ 0.89
CXCL12P48061 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CXCL12P48061 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CXCL12P48061 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.64■□□□□ 0.89
CXCL12P48061 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CXCL12P48061 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CXCL12P48061 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CXCL12P48061 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CXCL12P48061 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CXCL12P48061 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.63■□□□□ 0.89
CXCL12P48061 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CXCL12P48061 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.63■□□□□ 0.89
CXCL12P48061 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CXCL12P48061 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.63■□□□□ 0.89
CXCL12P48061 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.63■□□□□ 0.89
CXCL12P48061 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CXCL12P48061 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CXCL12P48061 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CXCL12P48061 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CXCL12P48061 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.62■□□□□ 0.89
CXCL12P48061 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CXCL12P48061 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CXCL12P48061 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CXCL12P48061 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.62■□□□□ 0.89
CXCL12P48061 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.62■□□□□ 0.89
CXCL12P48061 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.62■□□□□ 0.89
CXCL12P48061 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.62■□□□□ 0.89
CXCL12P48061 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.62■□□□□ 0.89
CXCL12P48061 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CXCL12P48061 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.62■□□□□ 0.89
CXCL12P48061 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CXCL12P48061 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CXCL12P48061 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CXCL12P48061 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CXCL12P48061 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL12P48061 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL12P48061 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL12P48061 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL12P48061 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL12P48061 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.61■□□□□ 0.89
CXCL12P48061 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL12P48061 CD177P1-201ENST00000606252 935 ntBASIC20.61■□□□□ 0.89
CXCL12P48061 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.61■□□□□ 0.89
CXCL12P48061 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL12P48061 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL12P48061 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL12P48061 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.61■□□□□ 0.89
CXCL12P48061 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.61■□□□□ 0.89
CXCL12P48061 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL12P48061 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL12P48061 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL12P48061 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL12P48061 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL12P48061 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL12P48061 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CXCL12P48061 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL12P48061 TMPOP1-202ENST00000424642 1267 ntBASIC20.6■□□□□ 0.89
CXCL12P48061 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.6■□□□□ 0.89
CXCL12P48061 AL445228.2-201ENST00000605589 952 ntBASIC20.6■□□□□ 0.89
CXCL12P48061 AC026471.5-201ENST00000615068 467 ntBASIC20.6■□□□□ 0.89
CXCL12P48061 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CXCL12P48061 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms