Protein–RNA interactions for Protein: P40541

IRR1, Cohesin subunit SCC3, yeastyeast

Predictions only

Length 1,150 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IRR1P40541 YAR070CYAR070C 300 nt3.6□□□□□ -1.83
IRR1P40541 YML009C-AYML009C-A 327 nt3.6□□□□□ -1.83
IRR1P40541 YPL225WYPL225W 441 nt3.6□□□□□ -1.83
IRR1P40541 YPL276WYPL276W 438 nt3.6□□□□□ -1.83
IRR1P40541 YPR039WYPR039W 336 nt3.6□□□□□ -1.83
IRR1P40541 BMS1YPL217C 3552 nt3.6□□□□□ -1.83
IRR1P40541 RDS1YCR106W 2499 nt3.6□□□□□ -1.83
IRR1P40541 CCT7YJL111W 1653 nt3.59□□□□□ -1.83
IRR1P40541 YPR022CYPR022C 3402 nt3.59□□□□□ -1.83
IRR1P40541 NDT80YHR124W 1884 nt3.59□□□□□ -1.83
IRR1P40541 YDL242WYDL242W 354 nt3.59□□□□□ -1.83
IRR1P40541 YER181CYER181C 324 nt3.59□□□□□ -1.83
IRR1P40541 NOP19YGR251W 591 nt3.59□□□□□ -1.83
IRR1P40541 ANB1YJR047C 474 nt3.59□□□□□ -1.83
IRR1P40541 YJR140W-AYJR140W-A 150 nt3.59□□□□□ -1.83
IRR1P40541 YKL111CYKL111C 336 nt3.59□□□□□ -1.83
IRR1P40541 RPS28BYLR264W 204 nt3.59□□□□□ -1.83
IRR1P40541 RPS7BYNL096C 573 nt3.59□□□□□ -1.83
IRR1P40541 TAF1YGR274C 3201 nt3.59□□□□□ -1.83
IRR1P40541 DIE2YGR227W 1578 nt3.59□□□□□ -1.84
IRR1P40541 MED1YPR070W 1701 nt3.58□□□□□ -1.84
IRR1P40541 PFK26YIL107C 2484 nt3.58□□□□□ -1.84
IRR1P40541 YHR139C-AYHR139C-A 312 nt3.58□□□□□ -1.84
IRR1P40541 RPC10YHR143W-A 213 nt3.58□□□□□ -1.84
IRR1P40541 tV(CAC)DtV(CAC)D 73 nt3.58□□□□□ -1.84
IRR1P40541 tV(CAC)HtV(CAC)H 73 nt3.58□□□□□ -1.84
IRR1P40541 PET191YJR034W 327 nt3.58□□□□□ -1.84
IRR1P40541 UNG1YML021C 1080 nt3.58□□□□□ -1.84
IRR1P40541 YPL038W-AYPL038W-A 192 nt3.58□□□□□ -1.84
IRR1P40541 NSL1YPL233W 651 nt3.58□□□□□ -1.84
IRR1P40541 SIZ1YDR409W 2715 nt3.58□□□□□ -1.84
IRR1P40541 AYT1YLL063C 1425 nt3.58□□□□□ -1.84
IRR1P40541 SPT10YJL127C 1923 nt3.58□□□□□ -1.84
IRR1P40541 SPP382YLR424W 2127 nt3.58□□□□□ -1.84
IRR1P40541 CDC50YCR094W 1176 nt3.57□□□□□ -1.84
IRR1P40541 MRH1YDR033W 963 nt3.57□□□□□ -1.84
IRR1P40541 PDC2YDR081C 2778 nt3.57□□□□□ -1.84
IRR1P40541 MDV1YJL112W 2145 nt3.57□□□□□ -1.84
IRR1P40541 RPS7AYOR096W 573 nt3.57□□□□□ -1.84
IRR1P40541 YPR016W-AYPR016W-A 261 nt3.57□□□□□ -1.84
IRR1P40541 APC11YDL008W 498 nt3.56□□□□□ -1.84
IRR1P40541 YDL068WYDL068W 330 nt3.56□□□□□ -1.84
IRR1P40541 HPA3YEL066W 540 nt3.56□□□□□ -1.84
IRR1P40541 YHL006W-AYHL006W-A 354 nt3.56□□□□□ -1.84
IRR1P40541 PEP8YJL053W 1140 nt3.56□□□□□ -1.84
IRR1P40541 SWM2YNR004W 441 nt3.56□□□□□ -1.84
IRR1P40541 YOR105WYOR105W 327 nt3.56□□□□□ -1.84
IRR1P40541 YOR146WYOR146W 306 nt3.56□□□□□ -1.84
IRR1P40541 FMP23YBR047W 528 nt3.56□□□□□ -1.84
IRR1P40541 SMC3YJL074C 3693 nt3.56□□□□□ -1.84
IRR1P40541 DAN4YJR151C 3486 nt3.56□□□□□ -1.84
IRR1P40541 CDH1YGL003C 1701 nt3.56□□□□□ -1.84
IRR1P40541 YDL180WYDL180W 1644 nt3.55□□□□□ -1.84
IRR1P40541 YAK1YJL141C 2424 nt3.55□□□□□ -1.84
IRR1P40541 NOP4YPL043W 2058 nt3.55□□□□□ -1.84
IRR1P40541 URA2YJL130C 6645 nt3.55□□□□□ -1.84
IRR1P40541 YER039C-AYER039C-A 219 nt3.55□□□□□ -1.84
IRR1P40541 YER188C-AYER188C-A 300 nt3.55□□□□□ -1.84
IRR1P40541 YHR052W-AYHR052W-A 195 nt3.55□□□□□ -1.84
IRR1P40541 YHR054W-AYHR054W-A 195 nt3.55□□□□□ -1.84
IRR1P40541 JIP3YLR331C 378 nt3.55□□□□□ -1.84
IRR1P40541 SHH3YMR118C 591 nt3.55□□□□□ -1.84
IRR1P40541 COQ10YOL008W 624 nt3.55□□□□□ -1.84
IRR1P40541 SIP3YNL257C 3690 nt3.55□□□□□ -1.84
IRR1P40541 GCD10YNL062C 1437 nt3.54□□□□□ -1.84
IRR1P40541 SPC72YAL047C 1869 nt3.54□□□□□ -1.84
IRR1P40541 SNT1YCR033W 3681 nt3.54□□□□□ -1.84
IRR1P40541 YSW1YBR148W 1830 nt3.54□□□□□ -1.84
IRR1P40541 MRPL31YKL138C 396 nt3.54□□□□□ -1.84
IRR1P40541 IOC3YFR013W 2364 nt3.54□□□□□ -1.84
IRR1P40541 YDR210W-BYDR210W-B 5313 nt3.53□□□□□ -1.84
IRR1P40541 YDR261W-BYDR261W-B 5313 nt3.53□□□□□ -1.84
IRR1P40541 YFL002W-AYFL002W-A 5313 nt3.53□□□□□ -1.84
IRR1P40541 YGR161W-BYGR161W-B 5313 nt3.53□□□□□ -1.84
IRR1P40541 YLR410W-BYLR410W-B 5313 nt3.53□□□□□ -1.84
IRR1P40541 YCL019WYCL019W 5313 nt3.53□□□□□ -1.84
IRR1P40541 YER076W-AYER076W-A 348 nt3.53□□□□□ -1.84
IRR1P40541 YER107W-AYER107W-A 321 nt3.53□□□□□ -1.84
IRR1P40541 ABM1YJR108W 372 nt3.53□□□□□ -1.84
IRR1P40541 AIM26YKL037W 357 nt3.53□□□□□ -1.84
IRR1P40541 RPL19BYBL027W 570 nt3.53□□□□□ -1.84
IRR1P40541 SSN8YNL025C 972 nt3.53□□□□□ -1.84
IRR1P40541 TCP1YDR212W 1680 nt3.52□□□□□ -1.85
IRR1P40541 DIA2YOR080W 2199 nt3.52□□□□□ -1.85
IRR1P40541 NPR1YNL183C 2373 nt3.52□□□□□ -1.85
IRR1P40541 PEP12YOR036W 867 nt3.52□□□□□ -1.85
IRR1P40541 VPS53YJL029C 2469 nt3.52□□□□□ -1.85
IRR1P40541 ENA5YDR038C 3276 nt3.52□□□□□ -1.85
IRR1P40541 ENA2YDR039C 3276 nt3.52□□□□□ -1.85
IRR1P40541 ENA1YDR040C 3276 nt3.52□□□□□ -1.85
IRR1P40541 DNM1YLL001W 2274 nt3.51□□□□□ -1.85
IRR1P40541 YGR027W-BYGR027W-B 5268 nt3.51□□□□□ -1.85
IRR1P40541 YLR227W-BYLR227W-B 5268 nt3.51□□□□□ -1.85
IRR1P40541 YPR158C-DYPR158C-D 5268 nt3.51□□□□□ -1.85
IRR1P40541 FYV4YHR059W 393 nt3.51□□□□□ -1.85
IRR1P40541 TIM8YJR135W-A 264 nt3.51□□□□□ -1.85
IRR1P40541 YKL118WYKL118W 312 nt3.51□□□□□ -1.85
IRR1P40541 VTI1YMR197C 654 nt3.51□□□□□ -1.85
IRR1P40541 RPL20BYOR312C 519 nt3.51□□□□□ -1.85
IRR1P40541 YBR137WYBR137W 540 nt3.51□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 25.4 ms