Protein–RNA interactions for Protein: P39702

VPS8, Vacuolar protein sorting-associated protein 8, yeastyeast

Predictions only

Length 1,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS8P39702 PUF6YDR496C 1971 nt3.21□□□□□ -1.9
VPS8P39702 BOI1YBL085W 2943 nt3.21□□□□□ -1.9
VPS8P39702 TSC11YER093C 4293 nt3.21□□□□□ -1.9
VPS8P39702 SPO71YDR104C 3738 nt3.2□□□□□ -1.9
VPS8P39702 YPL216WYPL216W 3309 nt3.2□□□□□ -1.9
VPS8P39702 YLR406C-AYLR406C-A 150 nt3.2□□□□□ -1.9
VPS8P39702 YML037CYML037C 1023 nt3.2□□□□□ -1.9
VPS8P39702 PIS1YPR113W 663 nt3.2□□□□□ -1.9
VPS8P39702 VPS64YDR200C 1815 nt3.2□□□□□ -1.9
VPS8P39702 YPP1YGR198W 2454 nt3.2□□□□□ -1.9
VPS8P39702 SRB8YCR081W 4284 nt3.2□□□□□ -1.9
VPS8P39702 YKR078WYKR078W 1758 nt3.2□□□□□ -1.9
VPS8P39702 RRM3YHR031C 2172 nt3.19□□□□□ -1.9
VPS8P39702 CEP3YMR168C 1827 nt3.19□□□□□ -1.9
VPS8P39702 RIF1YBR275C 5751 nt3.19□□□□□ -1.9
VPS8P39702 RRT16YNL105W 429 nt3.19□□□□□ -1.9
VPS8P39702 NOP15YNL110C 663 nt3.19□□□□□ -1.9
VPS8P39702 YBR076C-AYBR076C-A 267 nt3.19□□□□□ -1.9
VPS8P39702 CCT7YJL111W 1653 nt3.19□□□□□ -1.9
VPS8P39702 INP52YNL106C 3552 nt3.19□□□□□ -1.9
VPS8P39702 ITC1YGL133W 3795 nt3.18□□□□□ -1.9
VPS8P39702 NMA111YNL123W 2994 nt3.18□□□□□ -1.9
VPS8P39702 DBF20YPR111W 1695 nt3.18□□□□□ -1.9
VPS8P39702 BNA4YBL098W 1383 nt3.18□□□□□ -1.9
VPS8P39702 YDL009CYDL009C 324 nt3.18□□□□□ -1.9
VPS8P39702 GET1YGL020C 708 nt3.18□□□□□ -1.9
VPS8P39702 YGR053CYGR053C 852 nt3.18□□□□□ -1.9
VPS8P39702 RTS3YGR161C 792 nt3.18□□□□□ -1.9
VPS8P39702 YMR304C-AYMR304C-A 351 nt3.18□□□□□ -1.9
VPS8P39702 RPL23AYBL087C 414 nt3.18□□□□□ -1.9
VPS8P39702 OST2YOR103C 393 nt3.18□□□□□ -1.9
VPS8P39702 NET1YJL076W 3570 nt3.18□□□□□ -1.9
VPS8P39702 SLP1YOR154W 1764 nt3.17□□□□□ -1.9
VPS8P39702 APC11YDL008W 498 nt3.17□□□□□ -1.9
VPS8P39702 YDR442WYDR442W 393 nt3.17□□□□□ -1.9
VPS8P39702 HUR1YGL168W 333 nt3.17□□□□□ -1.9
VPS8P39702 TCD1YHR003C 1290 nt3.17□□□□□ -1.9
VPS8P39702 BIG1YHR101C 1008 nt3.17□□□□□ -1.9
VPS8P39702 DFG10YIL049W 762 nt3.17□□□□□ -1.9
VPS8P39702 SPC1YJR010C-A 285 nt3.17□□□□□ -1.9
VPS8P39702 HRI1YLR301W 735 nt3.17□□□□□ -1.9
VPS8P39702 YML108WYML108W 318 nt3.17□□□□□ -1.9
VPS8P39702 LEE1YPL054W 906 nt3.17□□□□□ -1.9
VPS8P39702 snR54snR54 86 nt3.17□□□□□ -1.9
VPS8P39702 MAL33YBR297W 1407 nt3.17□□□□□ -1.9
VPS8P39702 CDC55YGL190C 1581 nt3.17□□□□□ -1.9
VPS8P39702 MUD2YKL074C 1584 nt3.17□□□□□ -1.9
VPS8P39702 SNQ2YDR011W 4506 nt3.16□□□□□ -1.9
VPS8P39702 PSY2YNL201C 2577 nt3.16□□□□□ -1.9
VPS8P39702 SSF2YDR312W 1362 nt3.16□□□□□ -1.9
VPS8P39702 AIM29YKR074W 468 nt3.16□□□□□ -1.9
VPS8P39702 YOR029WYOR029W 336 nt3.16□□□□□ -1.9
VPS8P39702 YPL276WYPL276W 438 nt3.16□□□□□ -1.9
VPS8P39702 SEN54YPL083C 1404 nt3.16□□□□□ -1.9
VPS8P39702 RUD3YOR216C 1455 nt3.16□□□□□ -1.9
VPS8P39702 RAX2YLR084C 3663 nt3.15□□□□□ -1.9
VPS8P39702 DBP7YKR024C 2229 nt3.15□□□□□ -1.9
VPS8P39702 YER006C-AYER006C-A 318 nt3.15□□□□□ -1.91
VPS8P39702 ARV1YLR242C 966 nt3.15□□□□□ -1.91
VPS8P39702 RPL20AYMR242C 519 nt3.15□□□□□ -1.91
VPS8P39702 RGR1YLR071C 3249 nt3.15□□□□□ -1.91
VPS8P39702 YOL057WYOL057W 2136 nt3.14□□□□□ -1.91
VPS8P39702 YCR090CYCR090C 549 nt3.14□□□□□ -1.91
VPS8P39702 snR70snR70 164 nt3.14□□□□□ -1.91
VPS8P39702 PNC1YGL037C 651 nt3.14□□□□□ -1.91
VPS8P39702 BAT1YHR208W 1182 nt3.14□□□□□ -1.91
VPS8P39702 VPH2YKL119C 648 nt3.14□□□□□ -1.91
VPS8P39702 CMS1YLR003C 876 nt3.14□□□□□ -1.91
VPS8P39702 TIF11YMR260C 462 nt3.14□□□□□ -1.91
VPS8P39702 YNL146C-AYNL146C-A 195 nt3.14□□□□□ -1.91
VPS8P39702 ALG14YBR070C 714 nt3.14□□□□□ -1.91
VPS8P39702 BPT1YLL015W 4680 nt3.14□□□□□ -1.91
VPS8P39702 POM152YMR129W 4014 nt3.14□□□□□ -1.91
VPS8P39702 SSP1YHR184W 1716 nt3.13□□□□□ -1.91
VPS8P39702 MES1YGR264C 2256 nt3.13□□□□□ -1.91
VPS8P39702 RRT13YER066W 558 nt3.13□□□□□ -1.91
VPS8P39702 YER091C-AYER091C-A 222 nt3.13□□□□□ -1.91
VPS8P39702 YHL009W-AYHL009W-A 1242 nt3.13□□□□□ -1.91
VPS8P39702 OTU2YHL013C 924 nt3.13□□□□□ -1.91
VPS8P39702 YHR125WYHR125W 306 nt3.13□□□□□ -1.91
VPS8P39702 YOR385WYOR385W 873 nt3.13□□□□□ -1.91
VPS8P39702 YHR078WYHR078W 1659 nt3.13□□□□□ -1.91
VPS8P39702 MET6YER091C 2304 nt3.13□□□□□ -1.91
VPS8P39702 AHC2YCR082W 387 nt3.12□□□□□ -1.91
VPS8P39702 YGR121W-AYGR121W-A 216 nt3.12□□□□□ -1.91
VPS8P39702 YGR242WYGR242W 309 nt3.12□□□□□ -1.91
VPS8P39702 tW(CCA)G1tW(CCA)G1 72 nt3.12□□□□□ -1.91
VPS8P39702 tW(CCA)G2tW(CCA)G2 72 nt3.12□□□□□ -1.91
VPS8P39702 tW(CCA)JtW(CCA)J 72 nt3.12□□□□□ -1.91
VPS8P39702 tW(CCA)KtW(CCA)K 72 nt3.12□□□□□ -1.91
VPS8P39702 tW(CCA)MtW(CCA)M 72 nt3.12□□□□□ -1.91
VPS8P39702 tW(CCA)PtW(CCA)P 72 nt3.12□□□□□ -1.91
VPS8P39702 YKR033CYKR033C 426 nt3.12□□□□□ -1.91
VPS8P39702 YLR101CYLR101C 396 nt3.12□□□□□ -1.91
VPS8P39702 ALY1YKR021W 2748 nt3.12□□□□□ -1.91
VPS8P39702 GYP7YDL234C 2241 nt3.11□□□□□ -1.91
VPS8P39702 YDR269CYDR269C 324 nt3.11□□□□□ -1.91
VPS8P39702 YIL054WYIL054W 318 nt3.11□□□□□ -1.91
VPS8P39702 YAL037WYAL037W 804 nt3.11□□□□□ -1.91
VPS8P39702 YKL068W-AYKL068W-A 237 nt3.11□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 30.3 ms