Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKN1AP38936 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKN1AP38936 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKN1AP38936 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKN1AP38936 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKN1AP38936 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKN1AP38936 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKN1AP38936 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKN1AP38936 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKN1AP38936 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKN1AP38936 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
CDKN1AP38936 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.54■□□□□ 0.4
CDKN1AP38936 AC008403.3-201ENST00000598924 454 ntBASIC17.54■□□□□ 0.4
CDKN1AP38936 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKN1AP38936 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKN1AP38936 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKN1AP38936 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDKN1AP38936 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDKN1AP38936 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.53■□□□□ 0.4
CDKN1AP38936 AC092368.3-202ENST00000574180 1591 ntBASIC17.53■□□□□ 0.4
CDKN1AP38936 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDKN1AP38936 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKN1AP38936 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.53■□□□□ 0.4
CDKN1AP38936 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.53■□□□□ 0.4
CDKN1AP38936 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDKN1AP38936 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDKN1AP38936 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKN1AP38936 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CDKN1AP38936 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKN1AP38936 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKN1AP38936 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.53■□□□□ 0.4
CDKN1AP38936 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CDKN1AP38936 RPS2P4-201ENST00000476944 856 ntBASIC17.53■□□□□ 0.4
CDKN1AP38936 PNMA6B-201ENST00000538162 1200 ntBASIC17.53■□□□□ 0.4
CDKN1AP38936 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDKN1AP38936 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDKN1AP38936 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CDKN1AP38936 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.53■□□□□ 0.4
CDKN1AP38936 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDKN1AP38936 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.53■□□□□ 0.4
CDKN1AP38936 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CDKN1AP38936 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CDKN1AP38936 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.52■□□□□ 0.4
CDKN1AP38936 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKN1AP38936 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDKN1AP38936 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKN1AP38936 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKN1AP38936 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKN1AP38936 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.52■□□□□ 0.4
CDKN1AP38936 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.52■□□□□ 0.4
CDKN1AP38936 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CDKN1AP38936 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDKN1AP38936 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKN1AP38936 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDKN1AP38936 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDKN1AP38936 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKN1AP38936 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKN1AP38936 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.52■□□□□ 0.4
CDKN1AP38936 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.52■□□□□ 0.4
CDKN1AP38936 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.52■□□□□ 0.4
CDKN1AP38936 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.52■□□□□ 0.4
CDKN1AP38936 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.52■□□□□ 0.4
CDKN1AP38936 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKN1AP38936 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDKN1AP38936 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDKN1AP38936 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDKN1AP38936 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDKN1AP38936 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDKN1AP38936 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDKN1AP38936 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN1AP38936 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.51■□□□□ 0.39
CDKN1AP38936 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN1AP38936 CYP21A1P-202ENST00000354927 1481 ntBASIC17.51■□□□□ 0.39
CDKN1AP38936 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN1AP38936 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN1AP38936 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN1AP38936 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN1AP38936 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN1AP38936 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDKN1AP38936 AL596275.1-201ENST00000423464 877 ntBASIC17.51■□□□□ 0.39
CDKN1AP38936 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CDKN1AP38936 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.51■□□□□ 0.39
CDKN1AP38936 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN1AP38936 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN1AP38936 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.51■□□□□ 0.39
CDKN1AP38936 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN1AP38936 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDKN1AP38936 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.51■□□□□ 0.39
CDKN1AP38936 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.51■□□□□ 0.39
CDKN1AP38936 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN1AP38936 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CDKN1AP38936 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN1AP38936 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CDKN1AP38936 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.5■□□□□ 0.39
CDKN1AP38936 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDKN1AP38936 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.5■□□□□ 0.39
CDKN1AP38936 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.5■□□□□ 0.39
CDKN1AP38936 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.5■□□□□ 0.39
CDKN1AP38936 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.5■□□□□ 0.39
CDKN1AP38936 AL359736.2-201ENST00000621992 437 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms