Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDE6BP35913 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
PDE6BP35913 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.57■■□□□ 1.68
PDE6BP35913 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC25.57■■□□□ 1.68
PDE6BP35913 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
PDE6BP35913 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
PDE6BP35913 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC25.57■■□□□ 1.68
PDE6BP35913 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PDE6BP35913 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDE6BP35913 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PDE6BP35913 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC25.56■■□□□ 1.68
PDE6BP35913 RCN1P1-201ENST00000400413 996 ntBASIC25.56■■□□□ 1.68
PDE6BP35913 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PDE6BP35913 PGM5P4-201ENST00000421970 445 ntBASIC25.56■■□□□ 1.68
PDE6BP35913 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC25.56■■□□□ 1.68
PDE6BP35913 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC25.56■■□□□ 1.68
PDE6BP35913 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC25.56■■□□□ 1.68
PDE6BP35913 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC25.56■■□□□ 1.68
PDE6BP35913 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
PDE6BP35913 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PDE6BP35913 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDE6BP35913 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.55■■□□□ 1.68
PDE6BP35913 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDE6BP35913 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDE6BP35913 AC080038.3-201ENST00000623346 1952 ntBASIC25.55■■□□□ 1.68
PDE6BP35913 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDE6BP35913 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
PDE6BP35913 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDE6BP35913 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDE6BP35913 AL390719.1-204ENST00000412397 1219 ntBASIC25.55■■□□□ 1.68
PDE6BP35913 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC25.55■■□□□ 1.68
PDE6BP35913 PENK-204ENST00000518770 863 ntTSL 2 BASIC25.55■■□□□ 1.68
PDE6BP35913 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
PDE6BP35913 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.55■■□□□ 1.68
PDE6BP35913 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.54■■□□□ 1.68
PDE6BP35913 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDE6BP35913 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC25.54■■□□□ 1.68
PDE6BP35913 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC25.54■■□□□ 1.68
PDE6BP35913 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDE6BP35913 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.54■■□□□ 1.68
PDE6BP35913 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.54■■□□□ 1.68
PDE6BP35913 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
PDE6BP35913 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
PDE6BP35913 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDE6BP35913 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
PDE6BP35913 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PDE6BP35913 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC25.54■■□□□ 1.68
PDE6BP35913 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC25.54■■□□□ 1.68
PDE6BP35913 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
PDE6BP35913 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PDE6BP35913 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
PDE6BP35913 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PDE6BP35913 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.54■■□□□ 1.68
PDE6BP35913 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.54■■□□□ 1.68
PDE6BP35913 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDE6BP35913 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC25.54■■□□□ 1.68
PDE6BP35913 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDE6BP35913 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PDE6BP35913 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PDE6BP35913 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC25.53■■□□□ 1.68
PDE6BP35913 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC25.53■■□□□ 1.68
PDE6BP35913 FAM99A-202ENST00000538190 1989 ntBASIC25.53■■□□□ 1.68
PDE6BP35913 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
PDE6BP35913 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
PDE6BP35913 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
PDE6BP35913 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PDE6BP35913 RER1-204ENST00000378518 522 ntTSL 3 BASIC25.53■■□□□ 1.68
PDE6BP35913 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PDE6BP35913 PPOX-219ENST00000544598 813 ntTSL 2 BASIC25.53■■□□□ 1.68
PDE6BP35913 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC25.53■■□□□ 1.68
PDE6BP35913 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PDE6BP35913 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC25.53■■□□□ 1.68
PDE6BP35913 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PDE6BP35913 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
PDE6BP35913 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC25.53■■□□□ 1.68
PDE6BP35913 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PDE6BP35913 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
PDE6BP35913 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
PDE6BP35913 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PDE6BP35913 AC127496.7-201ENST00000625110 1798 ntBASIC25.52■■□□□ 1.68
PDE6BP35913 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC25.52■■□□□ 1.68
PDE6BP35913 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PDE6BP35913 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
PDE6BP35913 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDE6BP35913 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
PDE6BP35913 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC25.51■■□□□ 1.67
PDE6BP35913 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC25.51■■□□□ 1.67
PDE6BP35913 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC25.51■■□□□ 1.67
PDE6BP35913 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC25.51■■□□□ 1.67
PDE6BP35913 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PDE6BP35913 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDE6BP35913 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
PDE6BP35913 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDE6BP35913 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PDE6BP35913 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.51■■□□□ 1.67
PDE6BP35913 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25.51■■□□□ 1.67
PDE6BP35913 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.51■■□□□ 1.67
PDE6BP35913 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDE6BP35913 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PDE6BP35913 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms