Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 FP700111.2-201ENST00000619190 1892 ntBASIC19.53■□□□□ 0.72
PTPN6P29350 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN6P29350 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPN6P29350 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN6P29350 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN6P29350 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.52■□□□□ 0.72
PTPN6P29350 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.52■□□□□ 0.72
PTPN6P29350 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN6P29350 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN6P29350 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN6P29350 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.52■□□□□ 0.72
PTPN6P29350 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PTPN6P29350 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN6P29350 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.52■□□□□ 0.72
PTPN6P29350 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN6P29350 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN6P29350 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PTPN6P29350 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN6P29350 AP004607.4-201ENST00000530158 1459 ntBASIC19.52■□□□□ 0.72
PTPN6P29350 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PTPN6P29350 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.52■□□□□ 0.71
PTPN6P29350 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
PTPN6P29350 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PTPN6P29350 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PTPN6P29350 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPN6P29350 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN6P29350 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPN6P29350 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PTPN6P29350 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PTPN6P29350 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.51■□□□□ 0.71
PTPN6P29350 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.51■□□□□ 0.71
PTPN6P29350 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.51■□□□□ 0.71
PTPN6P29350 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PTPN6P29350 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PTPN6P29350 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PTPN6P29350 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN6P29350 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN6P29350 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PTPN6P29350 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.5■□□□□ 0.71
PTPN6P29350 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN6P29350 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN6P29350 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.5■□□□□ 0.71
PTPN6P29350 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PTPN6P29350 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.5■□□□□ 0.71
PTPN6P29350 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN6P29350 AC079140.4-201ENST00000507448 529 ntBASIC19.5■□□□□ 0.71
PTPN6P29350 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.5■□□□□ 0.71
PTPN6P29350 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.5■□□□□ 0.71
PTPN6P29350 AC092666.2-201ENST00000613287 246 ntBASIC19.5■□□□□ 0.71
PTPN6P29350 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PTPN6P29350 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN6P29350 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN6P29350 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.5■□□□□ 0.71
PTPN6P29350 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN6P29350 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN6P29350 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN6P29350 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN6P29350 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PTPN6P29350 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN6P29350 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPN6P29350 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPN6P29350 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPN6P29350 KRT18P61-201ENST00000585825 1298 ntBASIC19.49■□□□□ 0.71
PTPN6P29350 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN6P29350 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN6P29350 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN6P29350 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPN6P29350 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PTPN6P29350 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PTPN6P29350 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN6P29350 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPN6P29350 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PTPN6P29350 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PTPN6P29350 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN6P29350 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.49■□□□□ 0.71
PTPN6P29350 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.48■□□□□ 0.71
PTPN6P29350 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN6P29350 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.48■□□□□ 0.71
PTPN6P29350 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN6P29350 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.48■□□□□ 0.71
PTPN6P29350 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PTPN6P29350 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.48■□□□□ 0.71
PTPN6P29350 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN6P29350 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN6P29350 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN6P29350 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN6P29350 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
PTPN6P29350 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PTPN6P29350 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
PTPN6P29350 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.48■□□□□ 0.71
PTPN6P29350 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.48■□□□□ 0.71
PTPN6P29350 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.48■□□□□ 0.71
PTPN6P29350 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN6P29350 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN6P29350 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN6P29350 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN6P29350 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.48■□□□□ 0.71
PTPN6P29350 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN6P29350 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PTPN6P29350 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms