Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC27.38■■□□□ 1.97
RXRBP28702 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RXRBP28702 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
RXRBP28702 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC27.38■■□□□ 1.97
RXRBP28702 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
RXRBP28702 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
RXRBP28702 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RXRBP28702 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
RXRBP28702 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC27.38■■□□□ 1.97
RXRBP28702 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RXRBP28702 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RXRBP28702 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
RXRBP28702 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
RXRBP28702 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
RXRBP28702 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RXRBP28702 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC27.37■■□□□ 1.97
RXRBP28702 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC27.37■■□□□ 1.97
RXRBP28702 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC27.37■■□□□ 1.97
RXRBP28702 DBP-204ENST00000599385 709 ntTSL 3 BASIC27.37■■□□□ 1.97
RXRBP28702 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC27.37■■□□□ 1.97
RXRBP28702 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
RXRBP28702 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.37■■□□□ 1.97
RXRBP28702 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
RXRBP28702 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC27.36■■□□□ 1.97
RXRBP28702 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC27.36■■□□□ 1.97
RXRBP28702 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
RXRBP28702 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RXRBP28702 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC27.36■■□□□ 1.97
RXRBP28702 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RXRBP28702 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
RXRBP28702 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RXRBP28702 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
RXRBP28702 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RXRBP28702 BX664615.1-201ENST00000443558 458 ntBASIC27.36■■□□□ 1.97
RXRBP28702 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RXRBP28702 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC27.36■■□□□ 1.97
RXRBP28702 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC27.36■■□□□ 1.97
RXRBP28702 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RXRBP28702 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
RXRBP28702 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
RXRBP28702 AC116562.2-201ENST00000507042 360 ntBASIC27.35■■□□□ 1.97
RXRBP28702 AL691432.3-201ENST00000621860 400 ntBASIC27.35■■□□□ 1.97
RXRBP28702 CLN6-214ENST00000636314 442 ntTSL 3 BASIC27.35■■□□□ 1.97
RXRBP28702 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC27.35■■□□□ 1.97
RXRBP28702 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
RXRBP28702 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
RXRBP28702 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
RXRBP28702 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC27.34■■□□□ 1.97
RXRBP28702 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RXRBP28702 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RXRBP28702 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RXRBP28702 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RXRBP28702 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC27.34■■□□□ 1.97
RXRBP28702 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RXRBP28702 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC27.34■■□□□ 1.97
RXRBP28702 SAPCD2P2-201ENST00000431719 1174 ntBASIC27.34■■□□□ 1.97
RXRBP28702 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC27.34■■□□□ 1.97
RXRBP28702 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC27.34■■□□□ 1.97
RXRBP28702 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC27.34■■□□□ 1.97
RXRBP28702 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC27.34■■□□□ 1.97
RXRBP28702 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RXRBP28702 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
RXRBP28702 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
RXRBP28702 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC27.33■■□□□ 1.97
RXRBP28702 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RXRBP28702 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RXRBP28702 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RXRBP28702 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC27.33■■□□□ 1.97
RXRBP28702 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC27.33■■□□□ 1.97
RXRBP28702 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC27.33■■□□□ 1.97
RXRBP28702 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC27.33■■□□□ 1.97
RXRBP28702 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.33■■□□□ 1.96
RXRBP28702 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
RXRBP28702 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RXRBP28702 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.32■■□□□ 1.96
RXRBP28702 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC27.32■■□□□ 1.96
RXRBP28702 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC27.32■■□□□ 1.96
RXRBP28702 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RXRBP28702 FAM8A6P-201ENST00000407496 1135 ntBASIC27.32■■□□□ 1.96
RXRBP28702 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RXRBP28702 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC27.32■■□□□ 1.96
RXRBP28702 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC27.32■■□□□ 1.96
RXRBP28702 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
RXRBP28702 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RXRBP28702 NBPF21P-201ENST00000425093 1451 ntBASIC27.32■■□□□ 1.96
RXRBP28702 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC27.31■■□□□ 1.96
RXRBP28702 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC27.31■■□□□ 1.96
RXRBP28702 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RXRBP28702 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
RXRBP28702 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC27.31■■□□□ 1.96
RXRBP28702 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC27.31■■□□□ 1.96
RXRBP28702 AP002982.1-201ENST00000492365 877 ntBASIC27.31■■□□□ 1.96
RXRBP28702 CLEC4GP1-201ENST00000596555 870 ntBASIC27.31■■□□□ 1.96
RXRBP28702 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC27.31■■□□□ 1.96
RXRBP28702 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RXRBP28702 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
RXRBP28702 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC27.3■■□□□ 1.96
RXRBP28702 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
RXRBP28702 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RXRBP28702 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms