Protein–RNA interactions for Protein: P26441

CNTF, Ciliary neurotrophic factor, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFP26441 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTFP26441 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTFP26441 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTFP26441 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTFP26441 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNTFP26441 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTFP26441 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTFP26441 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.52■□□□□ 0.88
CNTFP26441 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.52■□□□□ 0.88
CNTFP26441 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTFP26441 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTFP26441 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTFP26441 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTFP26441 MIR939-201ENST00000401314 82 ntBASIC20.52■□□□□ 0.88
CNTFP26441 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.52■□□□□ 0.88
CNTFP26441 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNTFP26441 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.52■□□□□ 0.88
CNTFP26441 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.52■□□□□ 0.88
CNTFP26441 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.52■□□□□ 0.88
CNTFP26441 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.52■□□□□ 0.87
CNTFP26441 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CNTFP26441 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CNTFP26441 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CNTFP26441 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
CNTFP26441 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CNTFP26441 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNTFP26441 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTFP26441 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CNTFP26441 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.51■□□□□ 0.87
CNTFP26441 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTFP26441 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTFP26441 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CNTFP26441 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTFP26441 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTFP26441 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTFP26441 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
CNTFP26441 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.51■□□□□ 0.87
CNTFP26441 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.51■□□□□ 0.87
CNTFP26441 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNTFP26441 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNTFP26441 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTFP26441 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.51■□□□□ 0.87
CNTFP26441 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.51■□□□□ 0.87
CNTFP26441 KRT16P2-201ENST00000414673 1423 ntBASIC20.51■□□□□ 0.87
CNTFP26441 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTFP26441 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTFP26441 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTFP26441 AFG3L1P-217ENST00000557444 2447 ntBASIC20.51■□□□□ 0.87
CNTFP26441 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.5■□□□□ 0.87
CNTFP26441 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNTFP26441 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNTFP26441 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNTFP26441 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CNTFP26441 AC245052.3-201ENST00000450182 901 ntBASIC20.5■□□□□ 0.87
CNTFP26441 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTFP26441 RARRES2P11-201ENST00000635158 484 ntBASIC20.5■□□□□ 0.87
CNTFP26441 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.5■□□□□ 0.87
CNTFP26441 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTFP26441 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNTFP26441 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTFP26441 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNTFP26441 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNTFP26441 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTFP26441 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CNTFP26441 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.5■□□□□ 0.87
CNTFP26441 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTFP26441 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.5■□□□□ 0.87
CNTFP26441 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTFP26441 KRT87P-202ENST00000534226 1464 ntBASIC20.5■□□□□ 0.87
CNTFP26441 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTFP26441 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.49■□□□□ 0.87
CNTFP26441 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CNTFP26441 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CNTFP26441 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.49■□□□□ 0.87
CNTFP26441 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.49■□□□□ 0.87
CNTFP26441 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.49■□□□□ 0.87
CNTFP26441 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNTFP26441 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNTFP26441 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.49■□□□□ 0.87
CNTFP26441 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.49■□□□□ 0.87
CNTFP26441 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNTFP26441 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNTFP26441 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.49■□□□□ 0.87
CNTFP26441 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CNTFP26441 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.49■□□□□ 0.87
CNTFP26441 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.49■□□□□ 0.87
CNTFP26441 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CNTFP26441 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.48■□□□□ 0.87
CNTFP26441 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTFP26441 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.48■□□□□ 0.87
CNTFP26441 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTFP26441 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNTFP26441 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.48■□□□□ 0.87
CNTFP26441 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.48■□□□□ 0.87
CNTFP26441 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.48■□□□□ 0.87
CNTFP26441 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.48■□□□□ 0.87
CNTFP26441 AF213884.3-201ENST00000563833 479 ntBASIC20.48■□□□□ 0.87
CNTFP26441 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNTFP26441 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.48■□□□□ 0.87
CNTFP26441 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms