Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEPDP12955 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEPDP12955 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PEPDP12955 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
PEPDP12955 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEPDP12955 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEPDP12955 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PEPDP12955 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PEPDP12955 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEPDP12955 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.98■□□□□ 0.63
PEPDP12955 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.98■□□□□ 0.63
PEPDP12955 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PEPDP12955 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.98■□□□□ 0.63
PEPDP12955 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
PEPDP12955 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.98■□□□□ 0.63
PEPDP12955 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PEPDP12955 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PEPDP12955 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEPDP12955 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PEPDP12955 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PEPDP12955 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEPDP12955 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEPDP12955 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEPDP12955 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PEPDP12955 SLC7A5P2-201ENST00000553010 536 ntBASIC18.97■□□□□ 0.63
PEPDP12955 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.97■□□□□ 0.63
PEPDP12955 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PEPDP12955 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PEPDP12955 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PEPDP12955 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PEPDP12955 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PEPDP12955 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.97■□□□□ 0.63
PEPDP12955 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PEPDP12955 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.97■□□□□ 0.63
PEPDP12955 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEPDP12955 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.97■□□□□ 0.63
PEPDP12955 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.97■□□□□ 0.63
PEPDP12955 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PEPDP12955 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PEPDP12955 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEPDP12955 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PEPDP12955 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PEPDP12955 AL157384.1-201ENST00000445995 2473 ntBASIC18.96■□□□□ 0.63
PEPDP12955 LINC01521-201ENST00000504184 1943 ntBASIC18.96■□□□□ 0.63
PEPDP12955 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEPDP12955 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.96■□□□□ 0.63
PEPDP12955 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.96■□□□□ 0.63
PEPDP12955 AC090192.1-201ENST00000517740 490 ntBASIC18.96■□□□□ 0.63
PEPDP12955 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEPDP12955 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEPDP12955 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEPDP12955 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PEPDP12955 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PEPDP12955 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PEPDP12955 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PEPDP12955 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PEPDP12955 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PEPDP12955 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PEPDP12955 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PEPDP12955 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.95■□□□□ 0.62
PEPDP12955 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PEPDP12955 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PEPDP12955 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PEPDP12955 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PEPDP12955 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
PEPDP12955 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.95■□□□□ 0.62
PEPDP12955 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PEPDP12955 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PEPDP12955 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
PEPDP12955 MFSD11-216ENST00000590393 1141 ntBASIC18.95■□□□□ 0.62
PEPDP12955 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PEPDP12955 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PEPDP12955 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PEPDP12955 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PEPDP12955 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PEPDP12955 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PEPDP12955 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PEPDP12955 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PEPDP12955 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PEPDP12955 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PEPDP12955 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.94■□□□□ 0.62
PEPDP12955 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.94■□□□□ 0.62
PEPDP12955 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.94■□□□□ 0.62
PEPDP12955 KRT16P2-201ENST00000414673 1423 ntBASIC18.94■□□□□ 0.62
PEPDP12955 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PEPDP12955 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.94■□□□□ 0.62
PEPDP12955 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PEPDP12955 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PEPDP12955 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.94■□□□□ 0.62
PEPDP12955 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PEPDP12955 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.94■□□□□ 0.62
PEPDP12955 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.94■□□□□ 0.62
PEPDP12955 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.94■□□□□ 0.62
PEPDP12955 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PEPDP12955 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.94■□□□□ 0.62
PEPDP12955 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.94■□□□□ 0.62
PEPDP12955 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PEPDP12955 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PEPDP12955 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PEPDP12955 AC073111.5-205ENST00000641717 521 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms