Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CSB-PGBD3P0DP91 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC27.42■■□□□ 1.98
CSB-PGBD3P0DP91 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
CSB-PGBD3P0DP91 SERP1-205ENST00000487153 657 ntTSL 4 BASIC27.42■■□□□ 1.98
CSB-PGBD3P0DP91 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC27.42■■□□□ 1.98
CSB-PGBD3P0DP91 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
CSB-PGBD3P0DP91 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CSB-PGBD3P0DP91 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CSB-PGBD3P0DP91 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CSB-PGBD3P0DP91 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 KRASP1-201ENST00000407852 552 ntBASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 AP001412.1-201ENST00000608405 714 ntBASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 AC087633.2-202ENST00000565166 1439 ntBASIC27.41■■□□□ 1.98
CSB-PGBD3P0DP91 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC27.4■■□□□ 1.98
CSB-PGBD3P0DP91 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CSB-PGBD3P0DP91 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC27.4■■□□□ 1.98
CSB-PGBD3P0DP91 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CSB-PGBD3P0DP91 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
CSB-PGBD3P0DP91 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC27.4■■□□□ 1.98
CSB-PGBD3P0DP91 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC27.4■■□□□ 1.98
CSB-PGBD3P0DP91 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC27.4■■□□□ 1.98
CSB-PGBD3P0DP91 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CSB-PGBD3P0DP91 AC110285.5-201ENST00000611501 352 ntBASIC27.4■■□□□ 1.98
CSB-PGBD3P0DP91 AC133561.5-201ENST00000635547 218 ntBASIC27.4■■□□□ 1.98
CSB-PGBD3P0DP91 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CSB-PGBD3P0DP91 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
CSB-PGBD3P0DP91 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC27.4■■□□□ 1.98
CSB-PGBD3P0DP91 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CSB-PGBD3P0DP91 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CSB-PGBD3P0DP91 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
CSB-PGBD3P0DP91 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CSB-PGBD3P0DP91 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC27.39■■□□□ 1.98
CSB-PGBD3P0DP91 DHDH-203ENST00000522614 776 ntTSL 5 BASIC27.39■■□□□ 1.98
CSB-PGBD3P0DP91 AC005829.2-201ENST00000571422 1056 ntBASIC27.39■■□□□ 1.98
CSB-PGBD3P0DP91 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CSB-PGBD3P0DP91 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC27.39■■□□□ 1.98
CSB-PGBD3P0DP91 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC27.39■■□□□ 1.98
CSB-PGBD3P0DP91 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CSB-PGBD3P0DP91 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC27.39■■□□□ 1.97
CSB-PGBD3P0DP91 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CSB-PGBD3P0DP91 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
CSB-PGBD3P0DP91 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC27.39■■□□□ 1.97
CSB-PGBD3P0DP91 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CSB-PGBD3P0DP91 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 TSPY15P-201ENST00000457163 923 ntBASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 MAX-217ENST00000557277 728 ntTSL 3 BASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 MIR4785-201ENST00000585005 73 ntBASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 BRWD1-AS2-201ENST00000603064 1028 ntBASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CSB-PGBD3P0DP91 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
CSB-PGBD3P0DP91 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CSB-PGBD3P0DP91 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CSB-PGBD3P0DP91 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CSB-PGBD3P0DP91 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
CSB-PGBD3P0DP91 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC27.37■■□□□ 1.97
CSB-PGBD3P0DP91 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
CSB-PGBD3P0DP91 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC27.37■■□□□ 1.97
CSB-PGBD3P0DP91 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC27.37■■□□□ 1.97
CSB-PGBD3P0DP91 AL135905.2-201ENST00000584934 1404 ntBASIC27.37■■□□□ 1.97
CSB-PGBD3P0DP91 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
CSB-PGBD3P0DP91 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
CSB-PGBD3P0DP91 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CSB-PGBD3P0DP91 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
CSB-PGBD3P0DP91 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CSB-PGBD3P0DP91 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
CSB-PGBD3P0DP91 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CSB-PGBD3P0DP91 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CSB-PGBD3P0DP91 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC27.36■■□□□ 1.97
CSB-PGBD3P0DP91 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC27.36■■□□□ 1.97
CSB-PGBD3P0DP91 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CSB-PGBD3P0DP91 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC27.36■■□□□ 1.97
CSB-PGBD3P0DP91 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms