Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
HOXC6P09630 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
HOXC6P09630 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
HOXC6P09630 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
HOXC6P09630 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HOXC6P09630 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.39■■□□□ 1.33
HOXC6P09630 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HOXC6P09630 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.39■■□□□ 1.33
HOXC6P09630 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HOXC6P09630 AC087633.2-202ENST00000565166 1439 ntBASIC23.39■■□□□ 1.33
HOXC6P09630 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
HOXC6P09630 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
HOXC6P09630 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HOXC6P09630 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.38■■□□□ 1.33
HOXC6P09630 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.38■■□□□ 1.33
HOXC6P09630 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
HOXC6P09630 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
HOXC6P09630 AC133561.1-201ENST00000568600 2415 ntBASIC23.38■■□□□ 1.33
HOXC6P09630 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.38■■□□□ 1.33
HOXC6P09630 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
HOXC6P09630 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HOXC6P09630 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
HOXC6P09630 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.38■■□□□ 1.33
HOXC6P09630 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
HOXC6P09630 BX088651.1-201ENST00000540551 451 ntBASIC23.38■■□□□ 1.33
HOXC6P09630 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.38■■□□□ 1.33
HOXC6P09630 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
HOXC6P09630 LINC01023-201ENST00000606054 436 ntBASIC23.38■■□□□ 1.33
HOXC6P09630 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HOXC6P09630 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HOXC6P09630 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
HOXC6P09630 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
HOXC6P09630 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HOXC6P09630 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HOXC6P09630 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HOXC6P09630 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HOXC6P09630 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HOXC6P09630 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.37■■□□□ 1.33
HOXC6P09630 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.37■■□□□ 1.33
HOXC6P09630 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.37■■□□□ 1.33
HOXC6P09630 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.37■■□□□ 1.33
HOXC6P09630 AC120498.8-201ENST00000614275 531 ntBASIC23.37■■□□□ 1.33
HOXC6P09630 AC233723.2-201ENST00000623798 2106 ntBASIC23.37■■□□□ 1.33
HOXC6P09630 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
HOXC6P09630 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
HOXC6P09630 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.37■■□□□ 1.33
HOXC6P09630 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.37■■□□□ 1.33
HOXC6P09630 KRT17P2-201ENST00000300992 1314 ntBASIC23.36■■□□□ 1.33
HOXC6P09630 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
HOXC6P09630 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.36■■□□□ 1.33
HOXC6P09630 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.36■■□□□ 1.33
HOXC6P09630 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.36■■□□□ 1.33
HOXC6P09630 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.36■■□□□ 1.33
HOXC6P09630 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HOXC6P09630 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.36■■□□□ 1.33
HOXC6P09630 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.36■■□□□ 1.33
HOXC6P09630 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
HOXC6P09630 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
HOXC6P09630 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HOXC6P09630 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.35■■□□□ 1.33
HOXC6P09630 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
HOXC6P09630 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.35■■□□□ 1.33
HOXC6P09630 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.35■■□□□ 1.33
HOXC6P09630 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
HOXC6P09630 AC005829.2-201ENST00000571422 1056 ntBASIC23.35■■□□□ 1.33
HOXC6P09630 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
HOXC6P09630 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
HOXC6P09630 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
HOXC6P09630 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
HOXC6P09630 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HOXC6P09630 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HOXC6P09630 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.34■■□□□ 1.33
HOXC6P09630 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HOXC6P09630 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.34■■□□□ 1.33
HOXC6P09630 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HOXC6P09630 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HOXC6P09630 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
HOXC6P09630 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HOXC6P09630 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
HOXC6P09630 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HOXC6P09630 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
HOXC6P09630 MIR1224-201ENST00000408193 85 ntBASIC23.34■■□□□ 1.33
HOXC6P09630 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
HOXC6P09630 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.34■■□□□ 1.33
HOXC6P09630 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HOXC6P09630 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.34■■□□□ 1.33
HOXC6P09630 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.34■■□□□ 1.33
HOXC6P09630 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.34■■□□□ 1.33
HOXC6P09630 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.34■■□□□ 1.33
HOXC6P09630 AL049637.2-201ENST00000641778 930 ntBASIC23.34■■□□□ 1.33
HOXC6P09630 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HOXC6P09630 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
HOXC6P09630 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HOXC6P09630 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HOXC6P09630 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
HOXC6P09630 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.33■■□□□ 1.33
HOXC6P09630 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
HOXC6P09630 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.33■■□□□ 1.33
HOXC6P09630 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HOXC6P09630 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms