Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
COL5A2P05997 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
COL5A2P05997 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
COL5A2P05997 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
COL5A2P05997 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
COL5A2P05997 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
COL5A2P05997 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
COL5A2P05997 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
COL5A2P05997 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
COL5A2P05997 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC27.41■■□□□ 1.98
COL5A2P05997 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
COL5A2P05997 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
COL5A2P05997 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
COL5A2P05997 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
COL5A2P05997 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
COL5A2P05997 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC27.4■■□□□ 1.98
COL5A2P05997 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC27.4■■□□□ 1.98
COL5A2P05997 GRAP-204ENST00000573099 846 ntTSL 3 BASIC27.4■■□□□ 1.98
COL5A2P05997 RN7SL850P-201ENST00000579959 291 ntBASIC27.4■■□□□ 1.98
COL5A2P05997 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC27.4■■□□□ 1.98
COL5A2P05997 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
COL5A2P05997 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
COL5A2P05997 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
COL5A2P05997 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
COL5A2P05997 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
COL5A2P05997 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
COL5A2P05997 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC27.39■■□□□ 1.98
COL5A2P05997 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
COL5A2P05997 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC27.39■■□□□ 1.98
COL5A2P05997 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC27.39■■□□□ 1.98
COL5A2P05997 CABP2-204ENST00000636477 941 ntTSL 5 BASIC27.39■■□□□ 1.98
COL5A2P05997 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC27.39■■□□□ 1.98
COL5A2P05997 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC27.39■■□□□ 1.98
COL5A2P05997 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
COL5A2P05997 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
COL5A2P05997 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
COL5A2P05997 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
COL5A2P05997 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
COL5A2P05997 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC27.39■■□□□ 1.97
COL5A2P05997 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC27.39■■□□□ 1.97
COL5A2P05997 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC27.39■■□□□ 1.97
COL5A2P05997 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC27.39■■□□□ 1.97
COL5A2P05997 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
COL5A2P05997 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
COL5A2P05997 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL5A2P05997 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL5A2P05997 RER1-204ENST00000378518 522 ntTSL 3 BASIC27.38■■□□□ 1.97
COL5A2P05997 CD177P1-201ENST00000606252 935 ntBASIC27.38■■□□□ 1.97
COL5A2P05997 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC27.38■■□□□ 1.97
COL5A2P05997 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL5A2P05997 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL5A2P05997 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
COL5A2P05997 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
COL5A2P05997 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
COL5A2P05997 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL5A2P05997 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC27.38■■□□□ 1.97
COL5A2P05997 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC27.38■■□□□ 1.97
COL5A2P05997 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC27.38■■□□□ 1.97
COL5A2P05997 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL5A2P05997 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC27.37■■□□□ 1.97
COL5A2P05997 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC27.37■■□□□ 1.97
COL5A2P05997 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
COL5A2P05997 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC27.37■■□□□ 1.97
COL5A2P05997 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
COL5A2P05997 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
COL5A2P05997 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
COL5A2P05997 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
COL5A2P05997 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC27.37■■□□□ 1.97
COL5A2P05997 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
COL5A2P05997 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
COL5A2P05997 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC27.37■■□□□ 1.97
COL5A2P05997 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC27.37■■□□□ 1.97
COL5A2P05997 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC27.37■■□□□ 1.97
COL5A2P05997 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC27.37■■□□□ 1.97
COL5A2P05997 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC27.37■■□□□ 1.97
COL5A2P05997 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
COL5A2P05997 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL5A2P05997 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL5A2P05997 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL5A2P05997 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL5A2P05997 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC27.36■■□□□ 1.97
COL5A2P05997 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC27.36■■□□□ 1.97
COL5A2P05997 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
COL5A2P05997 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
COL5A2P05997 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC27.36■■□□□ 1.97
COL5A2P05997 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL5A2P05997 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC27.36■■□□□ 1.97
COL5A2P05997 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
COL5A2P05997 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
COL5A2P05997 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL5A2P05997 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL5A2P05997 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
COL5A2P05997 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
COL5A2P05997 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC27.35■■□□□ 1.97
COL5A2P05997 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC27.35■■□□□ 1.97
COL5A2P05997 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC27.35■■□□□ 1.97
COL5A2P05997 BRWD1-AS2-201ENST00000603064 1028 ntBASIC27.35■■□□□ 1.97
COL5A2P05997 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
COL5A2P05997 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
COL5A2P05997 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms