Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HLA-DPB1P04440 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 AC105265.2-201ENST00000467189 838 ntBASIC18.44■□□□□ 0.54
HLA-DPB1P04440 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.44■□□□□ 0.54
HLA-DPB1P04440 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HLA-DPB1P04440 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HLA-DPB1P04440 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
HLA-DPB1P04440 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms