Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 AC121338.2-201ENST00000622535 1744 ntBASIC15.46■□□□□ 0.07
HLA-DQA1P01909 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DQA1P01909 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DQA1P01909 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DQA1P01909 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 AL031848.2-201ENST00000607670 837 ntBASIC15.45■□□□□ 0.06
HLA-DQA1P01909 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DQA1P01909 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 MIR4281-201ENST00000580852 62 ntBASIC15.44■□□□□ 0.06
HLA-DQA1P01909 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DQA1P01909 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 KRT18P24-201ENST00000344739 1156 ntBASIC15.43■□□□□ 0.06
HLA-DQA1P01909 AC103834.1-201ENST00000520383 144 ntBASIC15.43■□□□□ 0.06
HLA-DQA1P01909 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 AC103724.3-201ENST00000564481 992 ntBASIC15.43■□□□□ 0.06
HLA-DQA1P01909 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 TCF3P1-201ENST00000423021 1937 ntBASIC15.43■□□□□ 0.06
HLA-DQA1P01909 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DQA1P01909 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms