Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
HLA-DRAP01903 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HLA-DRAP01903 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HLA-DRAP01903 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.15■■□□□ 1.14
HLA-DRAP01903 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
HLA-DRAP01903 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.15■■□□□ 1.14
HLA-DRAP01903 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.15■■□□□ 1.14
HLA-DRAP01903 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.15■■□□□ 1.14
HLA-DRAP01903 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
HLA-DRAP01903 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HLA-DRAP01903 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HLA-DRAP01903 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.15■■□□□ 1.14
HLA-DRAP01903 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HLA-DRAP01903 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HLA-DRAP01903 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HLA-DRAP01903 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
HLA-DRAP01903 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HLA-DRAP01903 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
HLA-DRAP01903 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
HLA-DRAP01903 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
HLA-DRAP01903 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
HLA-DRAP01903 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HLA-DRAP01903 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HLA-DRAP01903 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.14■■□□□ 1.13
HLA-DRAP01903 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HLA-DRAP01903 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
HLA-DRAP01903 AC026185.1-201ENST00000445748 174 ntBASIC22.14■■□□□ 1.13
HLA-DRAP01903 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HLA-DRAP01903 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.14■■□□□ 1.13
HLA-DRAP01903 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.14■■□□□ 1.13
HLA-DRAP01903 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.14■■□□□ 1.13
HLA-DRAP01903 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
HLA-DRAP01903 AC005181.1-201ENST00000604782 1256 ntBASIC22.14■■□□□ 1.13
HLA-DRAP01903 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.14■■□□□ 1.13
HLA-DRAP01903 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HLA-DRAP01903 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HLA-DRAP01903 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.14■■□□□ 1.13
HLA-DRAP01903 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
HLA-DRAP01903 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.14■■□□□ 1.13
HLA-DRAP01903 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.13■■□□□ 1.13
HLA-DRAP01903 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
HLA-DRAP01903 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HLA-DRAP01903 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HLA-DRAP01903 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.13■■□□□ 1.13
HLA-DRAP01903 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
HLA-DRAP01903 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
HLA-DRAP01903 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.13■■□□□ 1.13
HLA-DRAP01903 RARRES2P4-201ENST00000514074 484 ntBASIC22.13■■□□□ 1.13
HLA-DRAP01903 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.13■■□□□ 1.13
HLA-DRAP01903 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
HLA-DRAP01903 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
HLA-DRAP01903 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HLA-DRAP01903 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HLA-DRAP01903 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HLA-DRAP01903 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HLA-DRAP01903 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
HLA-DRAP01903 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HLA-DRAP01903 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HLA-DRAP01903 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
HLA-DRAP01903 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
HLA-DRAP01903 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HLA-DRAP01903 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.12■■□□□ 1.13
HLA-DRAP01903 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.12■■□□□ 1.13
HLA-DRAP01903 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.12■■□□□ 1.13
HLA-DRAP01903 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HLA-DRAP01903 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HLA-DRAP01903 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
HLA-DRAP01903 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HLA-DRAP01903 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
HLA-DRAP01903 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
HLA-DRAP01903 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.11■■□□□ 1.13
HLA-DRAP01903 AC007225.1-201ENST00000566331 1836 ntBASIC22.11■■□□□ 1.13
HLA-DRAP01903 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.11■■□□□ 1.13
HLA-DRAP01903 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HLA-DRAP01903 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
HLA-DRAP01903 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HLA-DRAP01903 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.11■■□□□ 1.13
HLA-DRAP01903 CROCCP5-201ENST00000436658 830 ntBASIC22.11■■□□□ 1.13
HLA-DRAP01903 AL050303.2-201ENST00000619798 666 ntBASIC22.11■■□□□ 1.13
HLA-DRAP01903 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.11■■□□□ 1.13
HLA-DRAP01903 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.11■■□□□ 1.13
HLA-DRAP01903 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HLA-DRAP01903 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HLA-DRAP01903 FP700111.2-201ENST00000619190 1892 ntBASIC22.11■■□□□ 1.13
HLA-DRAP01903 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.11■■□□□ 1.13
HLA-DRAP01903 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HLA-DRAP01903 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.1■■□□□ 1.13
HLA-DRAP01903 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.1■■□□□ 1.13
HLA-DRAP01903 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
HLA-DRAP01903 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.1■■□□□ 1.13
HLA-DRAP01903 MIR663A-201ENST00000385250 93 ntBASIC22.1■■□□□ 1.13
HLA-DRAP01903 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HLA-DRAP01903 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.1■■□□□ 1.13
HLA-DRAP01903 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.1■■□□□ 1.13
HLA-DRAP01903 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HLA-DRAP01903 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HLA-DRAP01903 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.1■■□□□ 1.13
HLA-DRAP01903 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.1■■□□□ 1.13
HLA-DRAP01903 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HLA-DRAP01903 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms