Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC24.63■■□□□ 1.53
MBD4O95243 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.63■■□□□ 1.53
MBD4O95243 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC24.63■■□□□ 1.53
MBD4O95243 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
MBD4O95243 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
MBD4O95243 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC24.63■■□□□ 1.53
MBD4O95243 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MBD4O95243 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
MBD4O95243 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MBD4O95243 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
MBD4O95243 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
MBD4O95243 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MBD4O95243 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
MBD4O95243 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
MBD4O95243 BET1L-207ENST00000529614 560 ntTSL 5 BASIC24.62■■□□□ 1.53
MBD4O95243 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
MBD4O95243 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MBD4O95243 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
MBD4O95243 GCK-205ENST00000437084 1385 ntTSL 5 BASIC24.62■■□□□ 1.53
MBD4O95243 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MBD4O95243 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.61■■□□□ 1.53
MBD4O95243 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
MBD4O95243 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MBD4O95243 KRT18P68-201ENST00000392293 1000 ntBASIC24.61■■□□□ 1.53
MBD4O95243 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
MBD4O95243 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.61■■□□□ 1.53
MBD4O95243 AC091874.3-201ENST00000512672 1195 ntBASIC24.61■■□□□ 1.53
MBD4O95243 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.61■■□□□ 1.53
MBD4O95243 AC083880.1-201ENST00000608266 535 ntBASIC24.61■■□□□ 1.53
MBD4O95243 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.61■■□□□ 1.53
MBD4O95243 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.61■■□□□ 1.53
MBD4O95243 MYC-209ENST00000641252 345 ntBASIC24.61■■□□□ 1.53
MBD4O95243 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
MBD4O95243 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
MBD4O95243 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC24.61■■□□□ 1.53
MBD4O95243 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24.61■■□□□ 1.53
MBD4O95243 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
MBD4O95243 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
MBD4O95243 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
MBD4O95243 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
MBD4O95243 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
MBD4O95243 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
MBD4O95243 AC007375.3-201ENST00000600936 2314 ntBASIC24.6■■□□□ 1.53
MBD4O95243 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
MBD4O95243 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.6■■□□□ 1.53
MBD4O95243 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
MBD4O95243 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC24.6■■□□□ 1.53
MBD4O95243 KRT18P6-201ENST00000555540 1265 ntBASIC24.6■■□□□ 1.53
MBD4O95243 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.6■■□□□ 1.53
MBD4O95243 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
MBD4O95243 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC24.6■■□□□ 1.53
MBD4O95243 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC24.6■■□□□ 1.53
MBD4O95243 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
MBD4O95243 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
MBD4O95243 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
MBD4O95243 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC24.59■■□□□ 1.53
MBD4O95243 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC24.59■■□□□ 1.53
MBD4O95243 AC005229.4-201ENST00000610085 2198 ntBASIC24.59■■□□□ 1.53
MBD4O95243 AC121338.2-201ENST00000622535 1744 ntBASIC24.59■■□□□ 1.53
MBD4O95243 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
MBD4O95243 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
MBD4O95243 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
MBD4O95243 SERPINH1P1-201ENST00000419794 1249 ntBASIC24.59■■□□□ 1.53
MBD4O95243 RHEB-204ENST00000472642 900 ntTSL 3 BASIC24.59■■□□□ 1.53
MBD4O95243 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC24.59■■□□□ 1.53
MBD4O95243 AL589743.5-201ENST00000616611 1050 ntBASIC24.59■■□□□ 1.53
MBD4O95243 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
MBD4O95243 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
MBD4O95243 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
MBD4O95243 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
MBD4O95243 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.59■■□□□ 1.53
MBD4O95243 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC24.59■■□□□ 1.53
MBD4O95243 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
MBD4O95243 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC24.58■■□□□ 1.53
MBD4O95243 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
MBD4O95243 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
MBD4O95243 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
MBD4O95243 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
MBD4O95243 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.58■■□□□ 1.53
MBD4O95243 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.58■■□□□ 1.53
MBD4O95243 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
MBD4O95243 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.58■■□□□ 1.53
MBD4O95243 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.58■■□□□ 1.53
MBD4O95243 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
MBD4O95243 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
MBD4O95243 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
MBD4O95243 AC087633.2-202ENST00000565166 1439 ntBASIC24.58■■□□□ 1.53
MBD4O95243 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
MBD4O95243 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.52
MBD4O95243 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
MBD4O95243 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MBD4O95243 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MBD4O95243 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.57■■□□□ 1.52
MBD4O95243 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.57■■□□□ 1.52
MBD4O95243 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MBD4O95243 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
MBD4O95243 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.57■■□□□ 1.52
MBD4O95243 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC24.57■■□□□ 1.52
MBD4O95243 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC24.57■■□□□ 1.52
MBD4O95243 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms